Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g0322 | ATGGATATCACCCTCACCACCATCCTTGTTTCCAATGGCGACTCCCGCATTCAGGTTGTTGTTTCTGATGGGGACCAACTCTCTCCCAAGAAACCTCACCTTTCTAGGACTCCCAGCTCTCACGATGAATGCAGAGTTTGTAATGCGGACATGGAAGAAGATTTGATAGAGCTTGGATGCCATTGTAGAGGTTGGCTTGCAAAAGCTCACCGAACATGTATAGATACTTGGTTCCGTACAAGAGGTTCAAACAAATGCGAGATATGCAAACAGGTAGCCGTAAATGTGCCACCTCCAGAGTCGCTGCCGAGTGGGGGTTTTAGACCAGTTTGCGTGGCTTTGACAATCCTCATTTTTGGTCTCCTGCTGGATGTGCTGGTATCAATTGTTTTTGGTGTGTCTTTACTGTGA | 411 | 0.4696 | MDITLTTILVSNGDSRIQVVVSDGDQLSPKKPHLSRTPSSHDECRVCNADMEEDLIELGCHCRGWLAKAHRTCIDTWFRTRGSNKCEICKQVAVNVPPPESLPSGGFRPVCVALTILIFGLLLDVLVSIVFGVSLL* | 137 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g0322 | 136 | PANTHER | ZINC FINGER, RING-CH-TYPE | 20 | 101 | - | - | |
Vvi2g0322 | 136 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 38 | 93 | IPR013083 | - | |
Vvi2g0322 | 136 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 36 | 96 | IPR011016 | GO:0008270 | |
Vvi2g0322 | 136 | SMART | ringv_2 | 43 | 90 | IPR011016 | GO:0008270 | |
Vvi2g0322 | 136 | Pfam | RING-variant domain | 44 | 89 | IPR011016 | GO:0008270 | |
Vvi2g0322 | 136 | SUPERFAMILY | RING/U-box | 40 | 92 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi2g0322 | Vvi-Chr2 | 2582738 | 2584091 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi2g0322 | 43 | 102 | C3H Transcription Factor Family | AT2G37950 | 44.444 | 8.50e-13 | 60.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g0322 | - | - | vvi:100854506 | 282.722 |