Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0312 ATGGCTGCGTCTTCTTCAAACGGCGTTGAGCATGTTGCAGGAGATATGTTCACAAGCGTTCCAAATGGAGATGCTATCTTCATGAAGTGGATACTCCACAGTTGA 105 0.4571 MAASSSNGVEHVAGDMFTSVPNGDAIFMKWILHS* 35
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0312 34 Gene3D Vaccinia Virus protein VP39 3 33 IPR029063 -
Vvi2g0312 34 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 34 IPR016461 GO:0008168
Vvi2g0312 34 Pfam O-methyltransferase domain 3 33 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0312 Vvi-Chr2 2501927 2502366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0312 8 33 Monolignol Biosynthesis Gene Families AT1G77520 80.769 1.11e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0312 K13066 - csv:101214916 57.7658