Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0311 ATGGAAAAAAGGCAGATGGTATCATCAACCGAGGAAGAGGAAGACAGCCACCGCGAGTATGCTATGCAATTGGTAAGCGCATCTGTACTGCCTATGGTGTTGAAAGCAGCCTTGGAGCTGGGTGTGCTGGACATCATAGGGAGGGCTGGACCAGGGGCACTTCTCTCCCCTTCAGAGATCGCATCCCACATCCCCACCCACAACCCTGATGCCCCTTTTGCACTTGATCGCATCCTCCGCCTTTTGGCTAGCCATTCCATTCTTACTTACTCTCTTGACACCCACCGTGATGGCAAGGTCCATAGGCTCTATGGTTTAGCACCCGTGGCCAAATACTTCGTCCCAAACCAAGATGGAGTTTCGCTGGCTATTTACCTACGAACCATTCAGGACAAGGTCACAGTGGATATCTGGCACCATCTTAAAGATGCAGTTCTGGAAGGGGGACTGCCATTTAAAAGATCCTACGGAATGGATGCCATTGATTATGTGGGGAAGGATGCCAGGTTCTTCGAGATGCTCAAGGCCTCCAACAGGGACTACATCCCAATGTTCATGAACAAAATCCTGGAAACTTACAAAGGTTTTGAAGGTCTAAAATCATTGGTGGACGTGGCTGGAGGCAACGGCAGTGTCCTCAATTTCATCGTTTCCAGGTATCCTTCCATCAAGGGTATCAACTTCGATTTGGCCCCTGTTATAGAGAAGTTGCCCTCTTACCCTGGCATTGAGCATGTTGCAGGGGATATGTTCACAAGCGTTCCAAAAGGAGATGCCATCTTCATGAAGAATATACTTCACAGTTGGAGTGATGAGCACTGCGTGAAGCTACTAAGGAATTGCTACCATGCATTACCAGACAATGGAAAAGTCATTGTGGTGGATGCGGTGATCCCAGATGCCCCCGAACCAAGCGCTCAGGTGAAAAGCACATATCAGCTTGATTTGTTTATGATGAATTTGAACCCTGATGGGAAGGAGAGGACAGAAAAAGAATTTGCAGAATTAGCAAAAGAAGCTGGATTTTTCAGTACCAAAGTGGCCGGCTGTGCTTATAGTTTCTCACTGGTGGAATTCCATAAAAAGATGTAG 1092 0.4753 MEKRQMVSSTEEEEDSHREYAMQLVSASVLPMVLKAALELGVLDIIGRAGPGALLSPSEIASHIPTHNPDAPFALDRILRLLASHSILTYSLDTHRDGKVHRLYGLAPVAKYFVPNQDGVSLAIYLRTIQDKVTVDIWHHLKDAVLEGGLPFKRSYGMDAIDYVGKDARFFEMLKASNRDYIPMFMNKILETYKGFEGLKSLVDVAGGNGSVLNFIVSRYPSIKGINFDLAPVIEKLPSYPGIEHVAGDMFTSVPKGDAIFMKNILHSWSDEHCVKLLRNCYHALPDNGKVIVVDAVIPDAPEPSAQVKSTYQLDLFMMNLNPDGKERTEKEFAELAKEAGFFSTKVAGCAYSFSLVEFHKKM* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0311 363 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Vvi2g0311 363 FunFam Caffeic acid 3-O-methyltransferase 1 113 - -
Vvi2g0311 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 359 IPR029063 -
Vvi2g0311 363 FunFam Caffeic acid O-methyltransferase 114 361 - -
Vvi2g0311 363 Pfam O-methyltransferase domain 138 342 IPR001077 GO:0008171
Vvi2g0311 363 Gene3D Vaccinia Virus protein VP39 115 361 IPR029063 -
Vvi2g0311 363 SUPERFAMILY "Winged helix" DNA-binding domain 12 116 IPR036390 -
Vvi2g0311 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 361 IPR016461 GO:0008168
Vvi2g0311 363 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Vvi2g0311 363 Gene3D - 1 113 IPR036388 -
Vvi2g0311 363 PANTHER O-METHYLTRANSFERASE 21 344 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0311 Vvi-Chr2 2496534 2497943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0311 14 363 Monolignol Biosynthesis Gene Families AT5G54160 55.429 3.87e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0311 K13066 - vvi:100232921 728.783