Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0310 ATGGAAGTTCAAAATCTTGAACATGGCAATATAATTGAAATTCATGGAGATGTGCCAACTGTAGAAACGAGCCTAAGCAGAAGTAAGATATGTGAGGGAGCAACATGTGGATTCTCAGATGCTAAAACAATTTCCAAGGATGACAAAGAGCGTGCAGCATCCATGAAGAAACTTTTGATAGCAGTTGTACTGTGTATCATTTTCATGAGTGTTGAAGTTGCTGGAGGTATTAAAGCCAACAGTCTTGCAATTTTAACGGATGCAGCTCATCTGTTGTCAGATGTTGCTGCCTTTGCTATCTCTTTGTTCTCGCTTTGGGCAGCAGGATGGGAAGCGACTCCACGTCAATCTTATGGTTTCTTCAGGATTGAGATACTTGGTGCACTGGTTTCCATCCAGATGATATGGCTTCTTGCTGGGATCCTCGTATATGAAGCTGTTGCAAGAATTATCCATGATACAGGTGAAGTCCAGGGCTTTCTTATGTTTATTGTTGCTGCCTTTGGTCTAGTTGTTAATGTTGTTATGGCTCTCCTTCTCGGTCATGATCATGCTCATGGGCATGGTGGACATGATCACGGGCATGGTGGGCACGATCATGGGCATGGTGGACATGATCATGGACATAGCAATGAGGATCATAATAACAGGCACCGGTATGGGATAAAAATTACCACACATGATCACCATCATGAGGAAAATTTCCAACACAGTGATGACCACCATCATGCTCATGAAGCTGGTCTCATGGCACCTCTGCTTGAGGGTTCTTCTGAGGGTGAACATAAGGTGAAGGGTGGAGTTAAGCAAAAGACACAGCGGAATATCAATGTACAGGGGGCGTATCTTCATGTACTTGGGGATTCCATCCAGAGCATTGGTGTAATGATTGGTGGTGCAATCATCTGGTATAAACCTGAGTGGAAGATTATTGACCTGATATGCACTCTCATATTCTCAGCAATTGTTCTGGGCACAACAATCAGGATGCTGCGGAACATTCTGGAGGTTCTGATGGAGAGCACACCGAGAGAGATTGATGCAACAAGGCTTGAGAAAGGTCTCTGTGAGATGGATGAGGTAGTTGCAATTCATGAATTGCACATCTGGGCCATAACTGTAGGGAAGGTGTTATTAGCTTGCCATGTCAAAATAAAGCCGGAAGCTGATGCTGACATGGTGCTAGACAAAGTTATAGACTACATCAGAAGGGAGTATAACATCAGCCATGTGACCATTCAGATAGAGCGTGAGTAG 1257 0.4399 MEVQNLEHGNIIEIHGDVPTVETSLSRSKICEGATCGFSDAKTISKDDKERAASMKKLLIAVVLCIIFMSVEVAGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAVARIIHDTGEVQGFLMFIVAAFGLVVNVVMALLLGHDHAHGHGGHDHGHGGHDHGHGGHDHGHSNEDHNNRHRYGIKITTHDHHHEENFQHSDDHHHAHEAGLMAPLLEGSSEGEHKVKGGVKQKTQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLICTLIFSAIVLGTTIRMLRNILEVLMESTPREIDATRLEKGLCEMDEVVAIHELHIWAITVGKVLLACHVKIKPEADADMVLDKVIDYIRREYNISHVTIQIERE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0310 418 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 7 417 - -
Vvi2g0310 418 MobiDBLite consensus disorder prediction 187 214 - -
Vvi2g0310 418 SUPERFAMILY Cation efflux protein transmembrane domain-like 54 340 IPR027469 -
Vvi2g0310 418 Gene3D Cation efflux protein transmembrane domain 54 338 IPR027469 -
Vvi2g0310 418 NCBIfam cation diffusion facilitator family transporter 55 417 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vvi2g0310 418 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 345 416 IPR036837 -
Vvi2g0310 418 Pfam Cation efflux family 58 339 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0310 Vvi-Chr2 2488355 2489611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0310 7 418 Inorganic Solute Cotransporters AT3G58810 65.375 1.92e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0310 K14689 - vvi:100241107 773.467