Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0306 ATGGCAACCCCTCATATCTCAGGCATTGTGGCACTTCTCAAAGCATTGCACCCCAGTTGGTCCCCCGTAGCTATCAAATCAGCACTTGTCACAACTGCATGGAGGACTGATCCTCTTGGAGAGCCTATTTTCGTGGAGGGATCCCCTCGGAAGCTTGCTGATCCATTTGATTATGGAGGAGGCATTGTGAACCCAAACAAGGCAGCTGAACCTGGTCTTGTATATGACATGGGCACATCTGACTACATACATTACCTCTGTTCTGTGGGTTATAACAACTCAGCTATCTCTCAGCTTGTGGAGCAACCCACGATCTGCCCCAACACCAAGGCCTCCATTTTGGATGTGAACCTACCCTCAATCACCATTTCAAATCTGAGAAAGTCCACCACTCTCACCAGAAAAGTCACAAACGTTGGACCCCAGAACTCCATGTATAAAGCAATGATTGAGCCTCCACTTGGCATACCTGTTACTGTAAGACCTGATATATTGGTTTTCAACTCTACCACCAAGTGGAAGTCTCCACCGCCCACCAGGTGTGAACACTGGATACTATTTTGGAAGCCTAACTTGGATGGATGGGGTGCACACTGTGTCAAGTCCCATATCTGTGAGGACACAGTTGATACAATCTTATGCAGATGA 648 0.4738 MATPHISGIVALLKALHPSWSPVAIKSALVTTAWRTDPLGEPIFVEGSPRKLADPFDYGGGIVNPNKAAEPGLVYDMGTSDYIHYLCSVGYNNSAISQLVEQPTICPNTKASILDVNLPSITISNLRKSTTLTRKVTNVGPQNSMYKAMIEPPLGIPVTVRPDILVFNSTTKWKSPPPTRCEHWILFWKPNLDGWGAHCVKSHICEDTVDTILCR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0306 215 Pfam Subtilase family 1 37 IPR000209 GO:0006508|GO:0008236
Vvi2g0306 215 Pfam Fibronectin type-III domain 115 171 IPR041469 -
Vvi2g0306 215 SUPERFAMILY Subtilisin-like 1 133 IPR036852 GO:0004252|GO:0006508
Vvi2g0306 215 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 174 IPR045051 -
Vvi2g0306 215 Gene3D - 86 175 - -
Vvi2g0306 215 ProSiteProfiles Serine proteases, subtilase domain profile. 1 69 - -
Vvi2g0306 215 Gene3D Peptidase S8/S53 domain 1 82 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0306 Vvi-Chr2 2468149 2468887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0306 1 172 Subtilisin-like Serine Gene Family AT4G10540 70.349 5.06e-81 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0306 - - pvy:116117193 279.641