Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0305 ATGGTTTACAGTTACAAACATGGCTTCTCTGGGTTTGCAGCCAAGCTTACAGACTCTCAAGCACAGAAGGTTGCAGATTTACCTGGAGTTGTCCATGTTATACCCAATCGACTTCATAAGCTGCAAACAACCAGGAGTTGGGATTACCTTGGCCTATCTTCTCAATCTCCATCCAATCTTCTGCATGAAACCAACATGGGGGGTGGGATTATTATTGGCCTCCTTGACACAGGAGTATGTCCGGAATCAGAAGTTTTCAACGATGAAGGGTTTGGGCCAATCCCTTCCCATTGGAAAGGTGGCTGTGTATCAGGAGAGCTCTTTAATGCCACAACAGACTGTAACAGAAAACTAATAGGAGCCCGGTGGTACATTGATGGGTTCCTTGCAGACAATGAGCAGCCATCCAACACCACTGAAAACCCGGATTACTTGTCCCCTAGAGATTCCATTGGACATGGCACACACACATCCACCATTGCTAGCGGTTCCTTCTTAGTTAATGCAAGCTACCAGGGCCTTGGCCTAGGAATAGTAAGAGGTGGTGCACCCCGGGCTCGTATAGCCATGTACAAAGTGTGCTGGAATGTGGCAGCAGGGCAATGTGCATCTGCTGATATATTGAAGGCTTTTGATGAAGCAATACATGATGGGGTGGATGTGTTATCAGTGTCCCTAGGCAGTGATATTCCTCTGTTCTCAGAAGTTGATGAGCGTGATGGGATTGCTATTGGTTCGTTTCATGCTGTGGCCAAGGGTATGACTGTTGTTTGTGGAGCTTCAACCGATGGCCCTTCTGCTCAGTCAGTACAGAACACAGCGCCTTGGATCTTAACTGTGGCGGCTAGCACTATTGATCGGTCCTTTCCTACGCCCATTACACTAGGGAACAACGTGACCATACTGGGTCAAGCCATGTTTCCAGGAAAGGAAATTGGTTTTAGTGGTTTGGTGCATCCAGAGACTCCAGGCCTCCTCCCTACAGCAGCCGGAGTCTGTGAGTCCCTGTCACTTAATAACACTACAGTGGCTGGAAATGTGGTCCTCTGCTTCACTACAGAGCTCGGCACCAAGATACTATTCTACATCAGATCCACCAGTTCTCCTACAGTGAAGTTGAGCTCTTCTAAAACACTAGTGGGGAAACCTGTGTCAACCAAGATAGCTTACTTCTCAAGTCGAGGGCCTAGTTCCATTGCACCAGCCAATTTGAAGGTATGA 1221 0.4783 MVYSYKHGFSGFAAKLTDSQAQKVADLPGVVHVIPNRLHKLQTTRSWDYLGLSSQSPSNLLHETNMGGGIIIGLLDTGVCPESEVFNDEGFGPIPSHWKGGCVSGELFNATTDCNRKLIGARWYIDGFLADNEQPSNTTENPDYLSPRDSIGHGTHTSTIASGSFLVNASYQGLGLGIVRGGAPRARIAMYKVCWNVAAGQCASADILKAFDEAIHDGVDVLSVSLGSDIPLFSEVDERDGIAIGSFHAVAKGMTVVCGASTDGPSAQSVQNTAPWILTVAASTIDRSFPTPITLGNNVTILGQAMFPGKEIGFSGLVHPETPGLLPTAAGVCESLSLNNTTVAGNVVLCFTTELGTKILFYIRSTSSPTVKLSSSKTLVGKPVSTKIAYFSSRGPSSIAPANLKV* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0305 406 Pfam Peptidase inhibitor I9 2 40 IPR010259 -
Vvi2g0305 406 CDD PA_subtilisin_like 293 373 - -
Vvi2g0305 406 Gene3D - 355 380 - -
Vvi2g0305 406 Gene3D - 286 353 - -
Vvi2g0305 406 ProSiteProfiles Serine proteases, subtilase domain profile. 46 406 - -
Vvi2g0305 406 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Vvi2g0305 406 Pfam Subtilase family 67 399 IPR000209 GO:0006508|GO:0008236
Vvi2g0305 406 SUPERFAMILY Subtilisin-like 41 398 IPR036852 GO:0004252|GO:0006508
Vvi2g0305 406 CDD Peptidases_S8_3 39 285 IPR034197 -
Vvi2g0305 406 Gene3D Peptidase S8/S53 domain 69 285 IPR036852 GO:0004252|GO:0006508
Vvi2g0305 406 Gene3D Peptidase S8/S53 domain 381 405 IPR036852 GO:0004252|GO:0006508
Vvi2g0305 406 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 351 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0305 Vvi-Chr2 2465968 2467958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0305 1 405 Subtilisin-like Serine Gene Family AT1G32940 59.649 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0305 - - pavi:110758937 645.58