Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0304 ATGTCTCTCTTTCTCTCCATCCAAAGACGCAAGCATTTGAGAGACAGTATGAGTAATTCAACTCCATTCTTTGTTCTGTTTTGTCTTCTGTTTGCTCTTGCACAAGCGGAGACCAGGACCAACGTTCATATAGTTTATCTGGGAGAGAGGCAACACAACGACCCCGAGCTTGTCAGGGATTCCCATCATGACATGCTGGCCAGCATAGTTGGGAGCAAGGAAGTGGCTTCAGAATTGATGGTGTACAGTTACAAACATGGCTTCTCTGGGTTTGCAGCCAAGCTTACAGAGTCTCAGGCACAGAGAATTGCTGAGTTGCCTGGTGTGCTTCGAGTCATCCCCAATTCCCTTCACCAGCTACAAACAACGAGGAGCTGGGATTACCTTGGCCTGTCTTTTCAATCTCCTAAAAATATTCTTCACAGCAGCAATATGGGGGATGGAGTAATCATTGGTGTCCTAGATACAGGAATATGGCCGGAGTCTAAATCTTTCAATGATGAAGGGTTTGGACCGATCCCATCTCAGTGGAAGGGTGTTTGTGAATCAGGGCAGCAATTCAATAGCACAATGCACTGTAACAGAAAAGTCATTGGAGCCCGTTGGTTTGTCAATGGATTTCTTGCTGAGTATGGACAGCCATTAAACACATCTGGAAACCAAGAATTCTTGTCTCCAAGAGATGCAAATGGACATGGTACACACACATCCAGCACTGCAGGTGGTTCTTTTGTCGGTAATGTGAGCTACAAGGGCCTTGCTTTAGGGACCGTAAGAGGTGGGGCACCCCATGCCCGGTTGGCTATTTATAAGGTGTGCTGGAATGTTCTTGGAGGACAATGCTCATCTGCAGATATACTGAAAGCCTTTGATGAAGCTATAAATGATGGGGTCCATGTGTTATCCCTGTCAATTGGGTCTTCTATTCCTCTATTCTCAGATATTGATGAACGTGATGGGATTGCCACTGGTTCCTTCCATGCAGTGGCTAAGGGCATCACTGTTGTTTGTGGAGCTTCAAATGATGGACCTCAAGCTCAGACAGTACAGAACACAGCACCATGGATATTAACTGTTGCAGCTAGCACCATGGATAGAGCATTTCCTACACCCATCACACTTGGAAACAATAAAACCTTGCTGGGTCAAGCCTTGTTTACAGGAAAGGAGACTGGTTTCTCAGGCTTGGTATATCCAGAGGTCTCAGGGCTTGCCCTAAACTCTGCAGGTCAGTGCGAAGCACTCTCACTTGATCAAACTTCAGTTGCTGGAAAAGTGGTGCTCTGCTTCACTTCAACGGTTAGGAGGGCCACTCTAATAAGTGCTTCATCAGATGTGCAAGCAGCAGGTGGCGTTGGGGTGATCATTGCCAAGAATCCCGGTGATAACTTGGCTGCATGCAGCAATGATTTTCCATGTGTTGAAGTTGACTATGAGATTGGAACCAGAATACTCTATTACATCCGGTCTACCAGGCTTCCTGTAGTAAATCTCAGCCCTTCTAAAACATTTGTGGGGGAGGCTGTTTTGGCCAAGGTTGCCTATTTCTCATCTAGAGGGCCTAACTCCATTGCCCCTGCAATTCTTAAGCCAGATATAACGGCCCCTGGTGTGAATATATTAGCTGCCACTGGTCCCCTCAATCGAGTGATGGATGGTGGCTATGCCATGCTTTCAGGAACATCAATGGCAACTCCTCATGTCTCTGGCGTTGTGGCACTCCTCAAAGCATTGCACCCTGATTGGTCCCCTGCAGCTATTAAGTCAGCACTAGTCACAACTGCATGGAGGAATGGTCCATCTGGCCTTCCAATCTTTGCCGAGGGGTTCCCTAAAAAGCTTGCTGATCCATTTGATTTTGGAGGTGGCATAGTAAATCCAAATGGTGCAACAGACCCAGGTTTGGTATATGACGTGGGTGCAACCGACCACATATATTATCTTTGTGCCGTGGGCTACAACAACTCTGCCATCTCTCAGCTTACAGGGCAATCCATAGTCTGCCCCAGTGAAAGGCCTTCCATTCTGGATGTAAACCTACCCTCCATAACCATACCAAACCTCAGAAATTCCACCACCCTCACCAGAACTGTCACAAATGTAGGTGCCCCTGAATCCATCTATAGAGTAGTGATTCAGCCTCCTATTGGTGTAGTCATAACAGTAAACCCTGATGTCTTGGTCTTCAACTCTATGACCAAATCAATCACTTTCAAGGTTACAGTCTCCTCGACCCATCACGTGAATACAGGATACTATTTTGGGAGCCTAACTTGGACGGATGGAGTTCATGAAGTGAGAAGTCCCCTGTCTGTGAGAACAGAGATCATCCAATCATATGTTGATGACAATTAA 2355 0.465 MSLFLSIQRRKHLRDSMSNSTPFFVLFCLLFALAQAETRTNVHIVYLGERQHNDPELVRDSHHDMLASIVGSKEVASELMVYSYKHGFSGFAAKLTESQAQRIAELPGVLRVIPNSLHQLQTTRSWDYLGLSFQSPKNILHSSNMGDGVIIGVLDTGIWPESKSFNDEGFGPIPSQWKGVCESGQQFNSTMHCNRKVIGARWFVNGFLAEYGQPLNTSGNQEFLSPRDANGHGTHTSSTAGGSFVGNVSYKGLALGTVRGGAPHARLAIYKVCWNVLGGQCSSADILKAFDEAINDGVHVLSLSIGSSIPLFSDIDERDGIATGSFHAVAKGITVVCGASNDGPQAQTVQNTAPWILTVAASTMDRAFPTPITLGNNKTLLGQALFTGKETGFSGLVYPEVSGLALNSAGQCEALSLDQTSVAGKVVLCFTSTVRRATLISASSDVQAAGGVGVIIAKNPGDNLAACSNDFPCVEVDYEIGTRILYYIRSTRLPVVNLSPSKTFVGEAVLAKVAYFSSRGPNSIAPAILKPDITAPGVNILAATGPLNRVMDGGYAMLSGTSMATPHVSGVVALLKALHPDWSPAAIKSALVTTAWRNGPSGLPIFAEGFPKKLADPFDFGGGIVNPNGATDPGLVYDVGATDHIYYLCAVGYNNSAISQLTGQSIVCPSERPSILDVNLPSITIPNLRNSTTLTRTVTNVGAPESIYRVVIQPPIGVVITVNPDVLVFNSMTKSITFKVTVSSTHHVNTGYYFGSLTWTDGVHEVRSPLSVRTEIIQSYVDDN* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0304 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 121 IPR037045 -
Vvi2g0304 784 SUPERFAMILY Subtilisin-like 41 704 IPR036852 GO:0004252|GO:0006508
Vvi2g0304 784 FunFam Subtilisin-like protease SBT1.5 148 374 - -
Vvi2g0304 784 FunFam Subtilisin-like protease SBT5.3 31 121 - -
Vvi2g0304 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 771 IPR045051 -
Vvi2g0304 784 CDD Peptidases_S8_3 118 596 IPR034197 -
Vvi2g0304 784 FunFam subtilisin-like protease SBT1.5 365 505 - -
Vvi2g0304 784 Pfam Peptidase inhibitor I9 42 119 IPR010259 -
Vvi2g0304 784 Gene3D - 365 505 - -
Vvi2g0304 784 Gene3D - 648 775 - -
Vvi2g0304 784 ProSiteProfiles Serine proteases, subtilase domain profile. 125 631 - -
Vvi2g0304 784 FunFam Subtilisin-like protease SBT1.5 648 775 - -
Vvi2g0304 784 Pfam Fibronectin type-III domain 677 772 IPR041469 -
Vvi2g0304 784 CDD PA_subtilisin_like 372 496 - -
Vvi2g0304 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Vvi2g0304 784 Pfam Subtilase family 146 599 IPR000209 GO:0006508|GO:0008236
Vvi2g0304 784 Pfam PA domain 411 483 IPR003137 -
Vvi2g0304 784 Gene3D Peptidase S8/S53 domain 148 643 IPR036852 GO:0004252|GO:0006508
Vvi2g0304 784 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Vvi2g0304 784 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Vvi2g0304 784 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0304 Vvi-Chr2 2458979 2463893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0304 33 784 Subtilisin-like Serine Gene Family AT4G10540 63.144 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0304 - - vvi:100258241 1556.96