Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0274 ATGGGAACACAGGTTGAGAGCTTGTGGGTTTTGGCTCTTGCTGCCAAATGCAGAGCTTTCTCTTCTGAAACTGTCCTCGTTTTTGGGTTTGCGCTGTGTTTGGTTTGGTTTGCTGTGGTTTTGTCCCACTGGGCTTACCCGGGAGGCCAAGCTTGGGGGAGGTACTGGAGCAAGAGAGGAAGTAAAGCTGAGGCCATCATCCCAGGGCCGCGAGGGCTTCCAGTGGTGGGGAGCATGAGTCTCATGGTGAACCTCGCTCATCACAACCTCGCGGCTGCTGCCGAGCGGCTAGGAGCGATGAGGCTCATGGCGTTCAGCCTTGGCGAGACTCGAGCCATCGTTACGAGCAACCCAGACGTGGCGAAAGAGATTTTGAACAGCTCGGCGTTTGCGGATCGGCCAGTGAAGGAGTGTGCGTACAGTCTGATGTTCAACCGCGCAATTGGATTCGCTCCCTATGGAGTTTACTGGCGAACCCTGCGGAGAATTGCCGCCACCCATCTCTTCTCTCCCAAACAAATCACTGCCTCGGAGACTCAGAGGTCCGAAATCGCTGCCCAGATGGTGTCACTCGTTGGCAGCTGTATTGGAGACATCCGCGTCCGCGATATTCTGAAGCGAGCTTCACTTCACCACATGATGTCCTCCGTATTCGGAAGCAAATACCGACTGGGTTCCTCAAATTCCGAAACGGATGAACTTAGTAGACTCGTCGAAGAAGGCTACGATCTCCTTGGCAAGCTCAACTGGTCCGACCACCTCCCTTGGCTTGCAGGGCTCGACCCTCAGAAAATCCGATTCAGATGCTCCAAACTCGTCCCCAGAGTGAATCGGTTCGTGAACCGGATCATCACTGAACATAGAGCTCAACCCGGCCCAACAACCCGAGATTTCGTCGATGTCCTACTCTCCCTTCAACAACCCGATAAGTTGTTGGATTCCGATATAATCGCCGTCTTATGGGAGATGATATTTCGGGGAACGGATACGGTGGCAGTTTTGATAGAGTGGATACTCGCAAGGATGGTACTCCACCCTGAGTGCCAATCAAGGGTCCACGATGAGCTGGATAGGGTGGTCGGAAAGTCACGGCCGGTGAAGGAATCCGACATTCCGGCGATGGTATACCTGGCGGCGGTCGTGAAGGAGGTTCTGAGGCTGCACCCACCGGGCCCACTGCTCTCGTGGGCCCGTTTATCAATCACAGATACCACGGTGGATGGCTATCACGTGCCTGCCGGGTCCACAGCGATGGTTAACATGTGGGCCATCACACGGGATCCACGAGTGTGGTCAGATCCACTCGACTTCACGCCCGACAGATTCGTGACCACCCCTGCTGACGTGGAATTCTCCTTGTTTGGATCCGATCTCAGGCTCGCTCCATTCGGGTCGGGCAGAAGAACCTGCCCCGGAAAGACCCTTGGCTTGACCACAGCCACCTTTTGGGTGGCGTCGCTGTTACATGAGTTCGAGTGGGTTCCATCCGACCCAAACCCGGTGGATCTATCCGAAGTGCTGAGGCTATCCTGCGAAATGGCACACCCTCTGACTGTGAGGGTGCGGCCCAGGCGAATATGA 1581 0.5547 MGTQVESLWVLALAAKCRAFSSETVLVFGFALCLVWFAVVLSHWAYPGGQAWGRYWSKRGSKAEAIIPGPRGLPVVGSMSLMVNLAHHNLAAAAERLGAMRLMAFSLGETRAIVTSNPDVAKEILNSSAFADRPVKECAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFSPKQITASETQRSEIAAQMVSLVGSCIGDIRVRDILKRASLHHMMSSVFGSKYRLGSSNSETDELSRLVEEGYDLLGKLNWSDHLPWLAGLDPQKIRFRCSKLVPRVNRFVNRIITEHRAQPGPTTRDFVDVLLSLQQPDKLLDSDIIAVLWEMIFRGTDTVAVLIEWILARMVLHPECQSRVHDELDRVVGKSRPVKESDIPAMVYLAAVVKEVLRLHPPGPLLSWARLSITDTTVDGYHVPAGSTAMVNMWAITRDPRVWSDPLDFTPDRFVTTPADVEFSLFGSDLRLAPFGSGRRTCPGKTLGLTTATFWVASLLHEFEWVPSDPNPVDLSEVLRLSCEMAHPLTVRVRPRRI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0274 526 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 Gene3D Cytochrome P450 54 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 CDD CYP78 98 517 - -
Vvi2g0274 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vvi2g0274 526 SUPERFAMILY Cytochrome P450 67 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PANTHER CYTOCHROME P450 78A7-RELATED 3 525 - -
Vvi2g0274 526 FunFam Cytochrome P450 78A5 59 524 - -
Vvi2g0274 526 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g0274 526 Pfam Cytochrome P450 68 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0274 Vvi-Chr2 2231928 2233589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0274 1 525 Cytochrome P450 AT2G46660 66.165 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0274 K20619 - vvi:100258159 1051.2