Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0265 ATGGGCAGAATGGCCCGGACGGGGACTTCTCACAAAACCTACAGTGCGAATCCTAGCGATTACAAGCTCCTCGAAGAGGTCGGTTACGGCGCGAGCGCGACGGTGTACAGAGCGATCTATCTTCCTTTCAATGAAGTGGTGGCCGTTAAGTGTTTGGATCTCGATCGCTGCAATAGCAATCTGGATGACATACGTAGGGAGGCTCAAACAATGAGTTTGATTGACCATCCAAATGTAATAAAGGCATACTGTTCATTTGTTGTTGAAAGAAATCTTTGGGTGGTCATGCCGTTCATGGCAGAAGGCTCTTGCTTACACCTCATGAAGATAGCATATACGGATGGATTTGAAGAGTCAGCCATTGGTTCTATCCTGAAAGAGACTCTTAAAGCCTTGGAGTACCTCCATCGACATGGACATATCCATCGGGATGTTAAGGCTGGAAATATACTACTTGACAGTAATGGAGTGGTAAAACTTGCCGATTTTGGTGTTTCAGCATGCATGTTTGACAAAGGTGATAGACAACGTTCAAGAAATACTTTTGTAGGAACTCCATGCTGGATGGCACCCGAGGTTTTGCAACCAGGAAGTGGATATGATTTCAAGGCTGATATTTGGTCATTTGGCATAACAGCTCTGGAGCTGGCTCATGGTCATGCACCCTTTTCAAAATATCCCCCAATGAAGGTCCTTCTGATGACCATACAGAATGCTCCTCCTGGACTTGACTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCTTGGTGAAAGATCAAACAAAAAGGCCAACTGCTGAGAAGTTACTAAAACATTCCTTTTTCAAGCAAGCTAAGCCTCCAGAACTTTCTGTAAAGAAATTATTTGCTGAGTTGCCACCACTTTGGCAGCGTGTGAAAGCCCTTCAGCTTAAAGATGCTGCACAACTGGCTCTGAAAAAAATGCCTTCAGCAGAACAAGAGGCCATATCACAGAGTGAGTACAAGAGAGGTGTCAGTGCCTGGAATTTTGATATCGAGGATTTAAAAGTACAAGCATCATTGGTACAAGATGATGATGAAATACAAGAAATGAGGGAAGAAGATGAAAGCATGAAATCATTTGTTATTGATAAGGATTCATCTGATTCCAGATCTAGTTTGGGAAAATCAATCTCCACTAATGACAATTTTTTCAGAGGACGAATAACTGGTGATGAATTAGCACAGGCAGAGTGCTTGAGCAAAAAGGGAAAGAGTTTGAGAAGTGATTCACTCGAGTCTAGCAATCAAGAGAAAATTGGTCAGGAAAAGGATATATCAAGTGCTGAGATGATGCCATCAACCTCAGAGAAGGACATGGTCAATGCCAAGACTAAAACTCAGATGGTGAAAGGTCGCCAGACACAGAGTGGACCCCTGATGCCTGGTGTTGTGCTTAGTCATTCATTGTCAGACAGGGGGCGCTCCTTTGAAAGGTCCGAGAATGAAATTCAACCTATTACTGAGAAAGCTAACCGTGAAGTACGGCGAGCACCAAGCTTTAGTGGTCCATTGATGCTTCCGAATCGAGCTTCAGCAAACAGTTTATCTGCTCCAATAAAATCTTCAGCGGGATACAGAGATTCTTTGGAGGAGAAGTCAAAGGCCAATCTGGTGCAAATAAAAGGACGGTTCTCAGTAACATCTGAGAACGTAGATCTTGTAAAGGATATTCCATTATGTGCAGTTGCACGCCGATCCTCTCAGGGATCACCACTCAGGAAGTCTGCTAGTGTTGGTGATTGGATGTTTGATTCTAAACCAATGCTCACTACACCAAAGGACTTTAGCAACAGTAATGTACCCGCATCACTTCTCATGCCTCACCTTCAGAATCTTTTTCAGCAGACCTCACTTCAACAGGATCTCATTACGAATTTGTTGAATAGCTTGCAATCATCTGAGATAGTAGATGCTTCTCAAAATGGCAAATTGCCCCCGTTACCTCGTGGTTCAGAAAACAATGGAAATGTAGATCCAGGGGCTTCTGAAAGGGAGCGTTTGCTTCTCTTGAAAGTCTCTGAGCTTCAGGCTAGGATGATTAATTTAACTGACGAACTAACAGCAGAGAAGTTTAAATACATGCAACTGCAGCAGCAGCTAAATGCTGTGTCAGGTCAGGAAGAAGATGGGGACAAACGAGAAGGAGATGCTTGA 2199 0.4334 MGRMARTGTSHKTYSANPSDYKLLEEVGYGASATVYRAIYLPFNEVVAVKCLDLDRCNSNLDDIRREAQTMSLIDHPNVIKAYCSFVVERNLWVVMPFMAEGSCLHLMKIAYTDGFEESAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGVVKLADFGVSACMFDKGDRQRSRNTFVGTPCWMAPEVLQPGSGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKQAKPPELSVKKLFAELPPLWQRVKALQLKDAAQLALKKMPSAEQEAISQSEYKRGVSAWNFDIEDLKVQASLVQDDDEIQEMREEDESMKSFVIDKDSSDSRSSLGKSISTNDNFFRGRITGDELAQAECLSKKGKSLRSDSLESSNQEKIGQEKDISSAEMMPSTSEKDMVNAKTKTQMVKGRQTQSGPLMPGVVLSHSLSDRGRSFERSENEIQPITEKANREVRRAPSFSGPLMLPNRASANSLSAPIKSSAGYRDSLEEKSKANLVQIKGRFSVTSENVDLVKDIPLCAVARRSSQGSPLRKSASVGDWMFDSKPMLTTPKDFSNSNVPASLLMPHLQNLFQQTSLQQDLITNLLNSLQSSEIVDASQNGKLPPLPRGSENNGNVDPGASERERLLLLKVSELQARMINLTDELTAEKFKYMQLQQQLNAVSGQEEDGDKREGDA* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0265 732 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Vvi2g0265 732 Pfam Protein kinase domain 21 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g0265 732 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 12 705 IPR047173 GO:0043539
Vvi2g0265 732 CDD STKc_OSR1_SPAK 19 282 - -
Vvi2g0265 732 FunFam Serine/threonine-protein kinase BLUS1 10 98 - -
Vvi2g0265 732 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Vvi2g0265 732 MobiDBLite consensus disorder prediction 415 454 - -
Vvi2g0265 732 ProSiteProfiles Protein kinase domain profile. 21 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g0265 732 Gene3D Transferase(Phosphotransferase) domain 1 102 334 - -
Vvi2g0265 732 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 102 332 - -
Vvi2g0265 732 MobiDBLite consensus disorder prediction 365 391 - -
Vvi2g0265 732 SMART serkin_6 21 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g0265 732 MobiDBLite consensus disorder prediction 367 385 - -
Vvi2g0265 732 MobiDBLite consensus disorder prediction 654 675 - -
Vvi2g0265 732 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0265 Vvi-Chr2 2150787 2160000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0265 14 723 MAP Kinase Kinase Kinase Kinase AT4G10730 66.854 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vvi2g0265 Pkinase 7.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0265 - - vvi:100249628 1427.54