Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0258 ATGCTGGTGCAAACCAGAGTGAGTTGCTACCAATACAAGGTTGGAGATTTGGATGCTTGGGGAATACCCTCCTCTGCAAATGCACATGTCTACACCAACTGGTCCAAGAACCACATTTTCAAGATTGGAGATTCTCTCCTGTTCTTATACCCACCAAGTCAAGATTCAGTGATTCAAGTCACAGGGCAGTCTTTCAATGCCTGCAACCTTACAGATCCAATCTTGTACATGAACAATGGTAATTCCCTCTTCAACATAACCTCCCTTGGCGAATTCTACTTCACCAGTGCAGTTCCAGGTCACTGTGAAAAGAAACAGAAGCTGCAAATTTCAGTGCTTTCTGGAAATGGCTCATCAGCATTCTCACCCTCTTATGGTCCTAGTGCTTTGCCTGATTCTTCTTACCCCACCGTCTTTGGCTCCATCCCTGCCGCAAATTCATCTTCACCATCACAGAGGGCGCCTGTGTTTTTAGCAGCTGTAATGGGATTTGTGTCATGGGATCTGATCAGAGGCAGAATGTGA 525 0.4571 MLVQTRVSCYQYKVGDLDAWGIPSSANAHVYTNWSKNHIFKIGDSLLFLYPPSQDSVIQVTGQSFNACNLTDPILYMNNGNSLFNITSLGEFYFTSAVPGHCEKKQKLQISVLSGNGSSAFSPSYGPSALPDSSYPTVFGSIPAANSSSPSQRAPVFLAAVMGFVSWDLIRGRM* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0258 174 CDD OsENODL1_like 10 113 IPR041846 -
Vvi2g0258 174 PANTHER BLUE COPPER PROTEIN 9 138 IPR039391 GO:0009055
Vvi2g0258 174 Gene3D - 10 123 IPR008972 -
Vvi2g0258 174 FunFam Early nodulin-like protein 1 9 117 - -
Vvi2g0258 174 Pfam Plastocyanin-like domain 29 104 IPR003245 GO:0009055
Vvi2g0258 174 SUPERFAMILY Cupredoxins 9 113 IPR008972 -
Vvi2g0258 174 ProSiteProfiles Phytocyanin domain profile. 10 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0258 Vvi-Chr2 2122242 2122926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0258 6 143 Phytocyanin Superfamily AT1G64640 61.151 4.65e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0258 - - vvi:100246223 357.836