Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0234 ATGGAGGTTTTTCTATCCTATAATCTTATTTTTTATTCTTTATTCTCTTGTTTTCTCTTCTTCTTCGTATCCTCCATGGCTGTTACCGAAGCTTCATCGCAGTGCTCTCCTGTGAAGCCCACCACCCCACTCGTCACCTTCCTTGATCGCCTCCAAGAAACGGCCTTCAAAACCTATGGCAACTCCGACTTCGACCCAAAGCTTTACGTGGATTTGTCTCTGAAATTCAATCTCTCAGACACAGAGGAGGCTTTTAAGAAGCTACCCAGGTCTGAAAATGGGTCGGTTTCGGTTGAGATTTTGGAGGGGTTTATGGGAGAGTACATGCGAGGTGCAGGGGAAGATTTGGTGGAGGTTGTGCCGGAGGATTATGTGCCGGAGCCGACGGGGTTCTTGCCGAAGGTGGAGAGTCCGGAGGTGAGAGCATGGGCATTGGAGGTGCATTCTCTTTGGAAGAATCTGAGCCGGAAAGTTTCGAACGGGGTTCGGGATCGGCCGGACCTGCACACTCTGCTTCCTCTTCCTAATCCAGTGGTGATTCCTGGATCGAGATTTAGAGAGGTTTACTATTGGGATTCTTACTGGGTTATTCGGGGCTTGCTAGCAAGTAAAATGCATGAGACGGCAAAAGCAATTGTTGCTAATCTGATTTCACTTATCGATGAATATGGTTATGTCCTAAACGGTGCAAGGGCATATTACAGCAATCGGAGCCAGCCCCCGCTCCTGAGTTCCATGATCTATGAAATATACAAGAGAACGGGTGATAAAGAAATGGTGAGAAAGTCTCTCCCTGCTTTGCTCAAGGAACATCAGTTTTGGAATTCAGGGAAACATAAGATGACCATTCAGGATGATCAAGCCTGTAATCACACTTTGAGTCGGTACTATGCAATGTGGGATAAACCGAGACCAGAGTCTTCAACTAATGACAAGGAGTCTGCTTCCAAGATCTTGGATGCTTCGGAGAAACAGCAATTTTACAGGGAACTGGCTTCAACTGCTGAATCTGGATGGGATTTCAGCACAAGATGGATGAGGAATTCTTCAGATTTCACGACATTGGCTACAACATCAATTCTACCCGTGGATTTGAATGCATTTATACTGAAGATGGAGCTTGACATAGCCTCCTTGGCAAAAGTTATTGGAGAAAATACCATCTCTGAACGCTTTGTGGAAGCTTCTCAAGGGAGAAAAAAGGCAATGGACTCTGTTTTCTGGAATGCAAAGATGGGACAATGGGTTGACTACTGGCTCGGTGACAATTCCACTTCATGCAAGGAAGTTCATAAATTAGAAGCTTCAAACCAGAACGAGAACGTGTTTGCTTCAAACTTTGTTCCTCTATGGATTGAGTTGTTTAACTCGGATGCTTCTGTGGTGGAGAAAGTTATGGAAAGTTTCCAAAGTTCGGGTTTGCTTTGCTCTGCTGGGATTGCAACTTCCTTGACAAATTCGGGACAACAATGGGATTTTCCAAATGGTTGGGCTCCAATTCAACACATGATAGTTGAAGGCCTGGTGAGATCTGGATTGAAAGAAGCAAGGTTGATGGCAGAAGATATTGCTATGAGGTGGATCAGAACCAACTATGCTGCCTACAAGAACACAAGCACAATGCTTGAAAAATATGATGTGGAAGAATGTGGAAAAATTGGAGGTGGCGGTGAATACATACCCCAGACTGGTTTTGGCTGGACAAATGGTGTTGTATTGGCATTCCTGGAGGAGTTTGGATGGACTAAGGACCAGAAGCTAGATTGCCAGTAA 1773 0.4501 MEVFLSYNLIFYSLFSCFLFFFVSSMAVTEASSQCSPVKPTTPLVTFLDRLQETAFKTYGNSDFDPKLYVDLSLKFNLSDTEEAFKKLPRSENGSVSVEILEGFMGEYMRGAGEDLVEVVPEDYVPEPTGFLPKVESPEVRAWALEVHSLWKNLSRKVSNGVRDRPDLHTLLPLPNPVVIPGSRFREVYYWDSYWVIRGLLASKMHETAKAIVANLISLIDEYGYVLNGARAYYSNRSQPPLLSSMIYEIYKRTGDKEMVRKSLPALLKEHQFWNSGKHKMTIQDDQACNHTLSRYYAMWDKPRPESSTNDKESASKILDASEKQQFYRELASTAESGWDFSTRWMRNSSDFTTLATTSILPVDLNAFILKMELDIASLAKVIGENTISERFVEASQGRKKAMDSVFWNAKMGQWVDYWLGDNSTSCKEVHKLEASNQNENVFASNFVPLWIELFNSDASVVEKVMESFQSSGLLCSAGIATSLTNSGQQWDFPNGWAPIQHMIVEGLVRSGLKEARLMAEDIAMRWIRTNYAAYKNTSTMLEKYDVEECGKIGGGGEYIPQTGFGWTNGVVLAFLEEFGWTKDQKLDCQ* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0234 590 Pfam Trehalase 64 580 IPR001661 GO:0004555|GO:0005991
Vvi2g0234 590 ProSitePatterns Trehalase signature 2. 490 499 IPR018232 GO:0004555|GO:0005991
Vvi2g0234 590 SUPERFAMILY Six-hairpin glycosidases 59 581 IPR008928 GO:0005975
Vvi2g0234 590 Gene3D - 58 589 IPR012341 GO:0005975
Vvi2g0234 590 PANTHER TREHALASE 35 587 IPR001661 GO:0004555|GO:0005991
Vvi2g0234 590 PRINTS Glycosyl hydrolase family 37 signature 360 377 IPR001661 GO:0004555|GO:0005991
Vvi2g0234 590 PRINTS Glycosyl hydrolase family 37 signature 563 576 IPR001661 GO:0004555|GO:0005991
Vvi2g0234 590 PRINTS Glycosyl hydrolase family 37 signature 483 499 IPR001661 GO:0004555|GO:0005991
Vvi2g0234 590 PRINTS Glycosyl hydrolase family 37 signature 223 241 IPR001661 GO:0004555|GO:0005991
Vvi2g0234 590 PRINTS Glycosyl hydrolase family 37 signature 293 310 IPR001661 GO:0004555|GO:0005991
Vvi2g0234 590 PRINTS Glycosyl hydrolase family 37 signature 328 345 IPR001661 GO:0004555|GO:0005991
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0234 23 581 Trehalose Biosynthesis Gene Families AT4G24040 60.924 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0234 K01194 - vvi:100246241 1174.07