Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0222 ATGATATCTCCGACGTATTTGTTCTCTGTGGATGGGGAGAGTGACGGAGCCCTCGGTCTTCCTGCTCGTGTTTTCAGGCACAAATTGCCAGAGTGGACTCCAAATGTACATTATTACCCCAGCAGAGAGTACCCTCGTCTTGAACATGCTTTGCATTACAATGTCAGGGGAACATTGGCTTTGCCAGTGTTCGAACCTTCAAGGCAGTCCTGTGTGGGTGTGCTTGAGCTTGTAATGACTTCGCAGAAGATTAACTATGCACCGGAGTTGGACAAAATCTGCAAAAGCCTTGGGGAGAGACGTAGGAAATTCTCTTTGTTGTTATATTTCAATTTCCTCTTATACAATGAAGGTTGCCAGAATGCCTTGGCTGAAATCTTGGAGATATTTACCATGGTGTGTGAAACCTACAAATTACCTATGGCTCAAACCTGGGTTCCCTGCAGCCACGGTAGTGGTCCGGGGAAGAGCTCTACTAGCTCTGATGGAAACTACATGGACCACGTCTGCATGTCCACGACTGATGTGGCATTCTACGTTGTAGACGCTCAGACGTGGGGCTTCCGGGAGGCTTGTGCCGAGCATCACCTTCAAAAGGGGCAAGGGGTTGCTGGGAGGGCATTTGAGTCCCATAACTAA 639 0.4851 MISPTYLFSVDGESDGALGLPARVFRHKLPEWTPNVHYYPSREYPRLEHALHYNVRGTLALPVFEPSRQSCVGVLELVMTSQKINYAPELDKICKSLGERRRKFSLLLYFNFLLYNEGCQNALAEILEIFTMVCETYKLPMAQTWVPCSHGSGPGKSSTSSDGNYMDHVCMSTTDVAFYVVDAQTWGFREACAEHHLQKGQGVAGRAFESHN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0222 212 PANTHER PROTEIN NLP8 1 211 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0222 Vvi-Chr2 1842611 1843381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0222 1 212 NLP Transcription Factor Family AT1G64530 68.950 4.44e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0222 - - vvi:100263398 325.865