Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0166 ATGAATGAAGTGACCTCTTGCGATACATCAAACAGTGTTGAAGAAAAGTCGAAGATCGATGCCGTGAAGCTGAATTCAAAGCCTTCGACGAGCGAATCTTCTGCACTGGAGAGGTCGAAACTGGCGTCGCAGAGCGGTGGGGCACCGGGCGGAGTAGTGTTCGCTGGAGGTGAGAGCAAGGGAGAGGCGGAGCTCGACGTGTATACCACATGGATCAGCGCCGGTGATCGGGTGGAGGTGGGCGATGGGAGACGCCATGACGGTGGCGCTGGGAGGGCTCGCCTGGTGCGATTCCCTGCCAGCGATGGAAGACACCCTGACTGTGGCACCGGGAGAGCTCGAGTTGTACGATTTCTACGCCGTGTACGACGGCCACGGCGGGGATCAGGTGGCGCACGCGTGCCGTCGGCATCTTCATTGCTGAGGTCGATGGGGTCGACGGCCGTGGTGGTGGTGGTCGGCGCAGAGAAGCTTGTGATAGCCAATTGTGGCGATTCGAGAGCTGTCCTATGCTGCAACGGCGTTGCCGTGCCATTATCTCGTGATCATAAGCCTGATAGACCTGATGAAAGGGAAAGGGTGGAAGCTGCCGGAGGAAACGTCATAAATTGGGATGGTTTTCGCGTCCTAGGAGTGCTTTCTATCTCACGATCAATAGGAGATTACTTTCTCAGGCCATATGTGATCTCCGAACCAGAAGTGACAGTTTGGGAACGAAAAGAGTCGGACGAGTTCCTTGTAATAGCAACTGATGGGCTATGGGATGTGGTTACTAACGAGCTTGCCTGCAAGTTGGTGAAGAGGTACCTCAGTGGCAAAATTCGGAGGAGATTCTCAGAGGGAACAAATGCGAGTTGTGCTATGGAGGCAGCTTCCATACTAACTGAACTGGCTATGGCTCGAGGAAGCAAAGACAATATCAGCGTGATAGTAGTCCAGCTGAAGAAACATCACTGCCATGGCAGTCTCAAGAAACCCAATAGGTCAAGCCCTTAG 996 0.5402 MNEVTSCDTSNSVEEKSKIDAVKLNSKPSTSESSALERSKLASQSGGAPGGVVFAGGESKGEAELDVYTTWISAGDRVEVGDGRRHDGGAGRARLVRFPASDGRHPDCGTGRARVVRFLRRVRRPRRGSGGARVPSASSLLRSMGSTAVVVVVGAEKLVIANCGDSRAVLCCNGVAVPLSRDHKPDRPDERERVEAAGGNVINWDGFRVLGVLSISRSIGDYFLRPYVISEPEVTVWERKESDEFLVIATDGLWDVVTNELACKLVKRYLSGKIRRRFSEGTNASCAMEAASILTELAMARGSKDNISVIVVQLKKHHCHGSLKKPNRSSP* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0166 331 ProSiteProfiles PPM-type phosphatase domain profile. 66 314 IPR001932 -
Vvi2g0166 331 FunFam Uncharacterized protein 118 320 - -
Vvi2g0166 331 Pfam Protein phosphatase 2C 140 307 IPR001932 -
Vvi2g0166 331 CDD PP2Cc 141 314 IPR001932 -
Vvi2g0166 331 PANTHER PROTEIN PHOSPHATASE 144 314 IPR015655 GO:0004722|GO:0006470
Vvi2g0166 331 SMART PP2C_4 43 312 IPR001932 -
Vvi2g0166 331 MobiDBLite consensus disorder prediction 23 41 - -
Vvi2g0166 331 MobiDBLite consensus disorder prediction 1 55 - -
Vvi2g0166 331 SUPERFAMILY PP2C-like 140 315 IPR036457 -
Vvi2g0166 331 Gene3D - 118 320 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0166 Vvi-Chr2 1482108 1488349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0166 143 316 PP2C-type Phosphatase Gene Family AT1G07430 52.913 5.69e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0166 K14497 - vvi:100241034 418.313