Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0147 ATGGAGAAAATGCAAGAAAACAATCTCCAATTCTCGTTCCAACATGGTGTGGACATCAGATCCTCACTATCACAGCTCCTATTGACAAGTGGCTCCAACACCTTGGATTCGATTTTCTCCCACTGTCCGCCATCAACCTCCGTCACCAACCCAGTTCTGGAGCCACTGGGATCTTCTGTGTATCTCCGGCAGAGAGATCTTCTTCAGAAATTCAGCGAAGAAAGCAGAGCGAGTGGGAGAATTACAAGCAATTCATTGACGAGCTCACTTCATCATTCTCAATTTCTGAATCCATGTAAGAAGAAGCTGTACAGGGGAGTGAGGCAGAGGCATTGGGGGAAGTGGGTGGCTGAGATTAGACTCCCTCAGAACAGAATGCGAGTGTGGTTGGGCACTTTCGACACTGCCGAGGCTGCAGCTTATGCCTACGACCGCGCAGCCTACAAGCTCCGAGGCGAATACGCGCGCTTGAATTTCCCCAACCTGAGGGACGCGAGCAAGCTCGGATTCGGAGACTGCGCCAGATTGAACGCTTTGAAGAGCTCCGTCGATGCCAAAATTCAGGCCATTTGCCAGAAAGTGAAAAGGGAGAGAGCCCATAAGACTACCAAAAGGAAGAGCACTAGTACCGGTGGTGAAGGTGGTGGTGGTGAAAGCACTGGCGGTGCGAAATGCTGTCACCAAGCGTTTCTGAAGATGAGTTCTGGAAAGGTGACAACTCGCGGGCCTCTCTCTCCGCGGACGGCCCGATGTTATATCAATTTATGTAGTAGAAGTATGTTATTTACTAGGTGA 795 0.5031 MEKMQENNLQFSFQHGVDIRSSLSQLLLTSGSNTLDSIFSHCPPSTSVTNPVLEPLGSSVYLRQRDLLQKFSEESRASGRITSNSLTSSLHHSQFLNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTFDTAEAAAYAYDRAAYKLRGEYARLNFPNLRDASKLGFGDCARLNALKSSVDAKIQAICQKVKRERAHKTTKRKSTSTGGEGGGGESTGGAKCCHQAFLKMSSGKVTTRGPLSPRTARCYINLCSRSMLFTR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0147 264 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Vvi2g0147 264 PRINTS Ethylene responsive element binding protein signature 104 115 IPR001471 GO:0003700|GO:0006355
Vvi2g0147 264 FunFam Ethylene-responsive transcription factor 2 102 161 - -
Vvi2g0147 264 Pfam AP2 domain 104 153 IPR001471 GO:0003700|GO:0006355
Vvi2g0147 264 SUPERFAMILY DNA-binding domain 103 161 IPR016177 GO:0003677
Vvi2g0147 264 ProSiteProfiles AP2/ERF domain profile. 103 160 IPR001471 GO:0003700|GO:0006355
Vvi2g0147 264 SMART rav1_2 103 166 IPR001471 GO:0003700|GO:0006355
Vvi2g0147 264 MobiDBLite consensus disorder prediction 198 220 - -
Vvi2g0147 264 CDD AP2 102 162 IPR001471 GO:0003700|GO:0006355
Vvi2g0147 264 Gene3D AP2/ERF domain 103 161 IPR036955 GO:0003700|GO:0006355
Vvi2g0147 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 23 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0147 Vvi-Chr2 1274105 1275209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0147 4 211 AP2-EREBP Transcription Factor Family AT1G64380 54.098 1.52e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vvi2g0147 AP2 4.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0147 - - vvi:100265543 394.815