Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0146 ATGACCATGGAAGAAGTTGACAGTGGGAGAGATGCCATGGAGATCGATGGCTGTGAACCCGAAGGCCAAGAAAAGATGAGAGAAAATGCCGTTCCCGATGGATTCAACGCTAATTATCTCAAAGTCTACTATGGAAAGCTTTTTCCACACTCGGATTTGTTTAAGTGGATGTCTTATGGAAATGATGGGAAGCATCCTGCCTGCGATCAGTCCTACATTGGCCGAAGAGAATTTTCTTTCACATTGGCTGATGACATTTACTTGCGGTTCCAGTCTTTCAACAGCGTCCACGAAATGGAAAATTCCATCAAAGAAAAATGCCCATTCAAAATAGATATTGGGCCCGTGTATAGTGTGGATCCTACTAAGAGGCATGCATATGCACAATCCGGTGACAATGTTTTTACTCCAGTTGAGAGGGAGCTAGTTTTTGATATTGATATAACAGATTATGATGATGTTAGATATTGCTGCTCCGGTGCTGATGTTTGCTTGGACTGCTGGCCTCTAATGACAGTAGCTATTAAAGTGATTGATACTGCCCTCAGAGATGATTTTGGGTTTAATCACATTCTTTGGGTGTATAGTGGTCGACGTGGTGTCCATTGCTGGGTTTGTGATGGAAGAGCAAGAAGGTTGTCCAATGAACAGAGGGCTGCTATTGCTGATTATTTCCGGGTCTACAAGGGCAATGAAAATAGTCAGAAAAAGGTTTCTTTAGTAGGTCCTGCTCTCCACCCTTTCCTTGCGCGTTCATATACTGAAGTTTTGAAGGATTTCTTTGAGGAGAAGTTACTCCCTGGTCAAAAGTTATTTTCAACTGAAGAGAGATATGAGAAGATCCTAAAAATAATTCCTGATGAATCTATTACTTCTGAGCTTCGGGGAAAGTGGCAGGAGAACAGGCGGTCCTCCATTTCAAAAGAAGATATTAATGCCATTCGTTGGGAGCAACTAAAACATATGCTGCAATCTGGAAAGCAGAAGGCACAAGGTCTTCGCAGGTGTGTTGAAGAGATTGTGTTCTCTTATACCTACCCTAGGCTTGATATGGAGGTTTCAAAACACATGAACCATTTGCTAAAGGCACCATTTTGTGTGCACCCAAAAACAGGTCGTGTGTGTGTTCCTATTGACCCTAAAAGTTGTGAGGAATTTGATCCTACCAGTGTACCAACCCTTTCCAAGCTTTTGGAAGAACTTAACATGGGAGGTTTTAGAGCAGATGCAGATGATGAATGGGAGAGAACCTCACTTGGAAAATCAGTCAAGTTTTTCAGATTATCATTCTTGCAGCCTTTACTGAAGTCCTGCAAGGAGGAGATTGAAAGTGCTTACAACGCCAAGCTTCAGCTCTCAAAGAATTCTCTGAGTTGGTAG 1380 0.4232 MTMEEVDSGRDAMEIDGCEPEGQEKMRENAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDGRARRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLLKSCKEEIESAYNAKLQLSKNSLSW* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0146 459 Coils Coil 435 455 - -
Vvi2g0146 459 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 41 398 IPR014052 GO:0003896|GO:0006269
Vvi2g0146 459 Pfam DNA primase small subunit 144 379 IPR002755 GO:0003896|GO:0006269
Vvi2g0146 459 CDD AE_Prim_S 49 388 IPR014052 GO:0003896|GO:0006269
Vvi2g0146 459 Gene3D DNA primase, PRIM domain 27 440 - -
Vvi2g0146 459 MobiDBLite consensus disorder prediction 1 23 - -
Vvi2g0146 459 PANTHER DNA PRIMASE SMALL SUBUNIT 26 444 - -
Vvi2g0146 459 FunFam DNA primase 27 440 - -
Vvi2g0146 459 SUPERFAMILY Prim-pol domain 37 401 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0146 1 459 Core DNA Replication Machinery Family AT5G41880 66.304 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0146 K02684 - vvi:100260326 952.97