Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0120 ATGGAGCAGTTTCGGCAGATTGGAGAGGTTTGGGGGAGTTTGAAGGCTCTAATGGTGTTCAAAGACGACATACAGATAAACAAGCGTCAGTGTTGTTTGTTGTTTGATATCTTCAGTTCAGCCTTCAAAACAATTGTAGAGGAGATCAGGCAGAACCTGAGATTAGAAGAGAAGAACACCAAATGGAAAGCTCTTGAACAGCCTTTAAGAGAGCTTCACAGGGCTTTTAAAGACGCAGAACTATACATCAGGAACTGCTTGGACACCAAGGACTGGTGGGGCAAAGCAATGAGCCTCCACCAGAACAATGACTCTGTTGAGTTTCACATCCATAACTTGCTCTGCACTTTTCCTATTGTCATTGAAGCAATTGAGACTGCCGGAGAAATGTCGGGACTTGCACTTGCCACAAAGTATGAGAAAGAGTGGAATGACCCCAAGCTTTTCCAGTGGAAATTTGGAAAGCAGTACCTGGTTACCCGAGAAATTTGCAGTAGGTTGGAGAGTGCTTGGAAGGAAGATAGGTGGCTTCTTCTTGAAATGATTAGGGAGAAGAAAAGTTCAGGGTCAGTTGGGAAGAATGAGCAGAAGCTTGGAGACCTGCTGCTTAAGAAACTAAATGGATCAGAGAAGTTCAACGGGAAGCTTTCCCCGGGTTCAGTATTGGTAGGAGCAAAGGATTATCAGGTGAAGCGTAGATTGGAAGGGGGAAGCCAGTGTAAGGAGATTCAGTGGTTGGGGGAGGGTTTTGCTTTGAGGCAATTTTTTGGGGAGATTGAGCCATTGAATTCAGAGATTTCTTCTCTGTTGTCACTTTCCCACCCCAACATAATGCAGTACCTTTGTGGATTTTATGATGAGGAAAAGAAAGAGTGCTTACTTGTGATGGAGATGATGAACAAGGATCTTCACAGTCAGATTAAAGAAAATTGTGGACAAAGGAGGCGTATTCTGTTTCCTCTCCCGGTCATGGTTGATCTCATGCTTCAGATTGCCAGAGGCATGGAGTATCTTCACTCTGTGAAGGTCTATCATGGAGATTTAAACCCTTCTAATATTTTTCTGAAGGCAAGGAACTCCTCCACTGAAGGTTACTTCCATGCAAAAGTTTCGGGTTTTGGGCTATCGTCCATCAAGAATCACACTTTTTCTCGGAGCTCCCCAGGCCAGAATGGAACTGACCCTCTCATTTGGCATGCACCAGAGGTTCTGGCTGAGCAAGAACAGCTAGGAAGTAGTTGTAGTTCCAAGTTCTCAGAGAAAGCTGATGTTTACAGTTTTGGAATGCTTTGTTTTGAGCTTCTGACTGGGAAAGTTCCTTTTGAGGATAGCCATCTTCAAGGAGACAAGATGAGCAGAAACATAAGAGCAGGCGAGAGGCCTCTTTTCCCATTCCCTTCACACAAGTACCTTGCAAACCTAGCCAAAAGATGCTGGCACACTGACCCAGTTCAGCGCCCAAGTTTCTCTTCCATATGTAGAATTCTTCGCTACATCAAGAGGTTCCTTGTGCAGAACCCTGATCACAGTCAACCGGAACTGACACAGCCACCTGTAGATTACTTTGAACTGGAGGCAGGGTTTGTGAAGAAGCTTACCGTGGAGGGGCAACTTGATCCAATGCCTGTATCACAAATTCCTTTTCAGATGTTTGCTTATAGACTGGTAGAAAAAGAGAAGACCTCACTGGACTATAAAGACAAGAGCTCGGAATCAGCAAGTGAGGCAGCAGCTTCAGGTTCTGGGGATGAGAATGTTGCGCTAGTAGATGATCCATTTCTGCAAGCAAGCGAAGGTAGGTTAGTTTGTTCAGAGACTCCAGAAAAGAAAATATCACCCGCAAAGATATCTGCAGAATCAAAAACCCGAAGAAGTCTAGGAACACCAAAAGCTCAAGCTCAGAAACCGACACCATTGAAACCATGTGGCGGCATGAAACTGAATCGAGGGGCACAGATGGGACTGGGAAGAACATCCGGGCATGCCTTAGATTCAGATGTATCATAG 2007 0.4499 MEQFRQIGEVWGSLKALMVFKDDIQINKRQCCLLFDIFSSAFKTIVEEIRQNLRLEEKNTKWKALEQPLRELHRAFKDAELYIRNCLDTKDWWGKAMSLHQNNDSVEFHIHNLLCTFPIVIEAIETAGEMSGLALATKYEKEWNDPKLFQWKFGKQYLVTREICSRLESAWKEDRWLLLEMIREKKSSGSVGKNEQKLGDLLLKKLNGSEKFNGKLSPGSVLVGAKDYQVKRRLEGGSQCKEIQWLGEGFALRQFFGEIEPLNSEISSLLSLSHPNIMQYLCGFYDEEKKECLLVMEMMNKDLHSQIKENCGQRRRILFPLPVMVDLMLQIARGMEYLHSVKVYHGDLNPSNIFLKARNSSTEGYFHAKVSGFGLSSIKNHTFSRSSPGQNGTDPLIWHAPEVLAEQEQLGSSCSSKFSEKADVYSFGMLCFELLTGKVPFEDSHLQGDKMSRNIRAGERPLFPFPSHKYLANLAKRCWHTDPVQRPSFSSICRILRYIKRFLVQNPDHSQPELTQPPVDYFELEAGFVKKLTVEGQLDPMPVSQIPFQMFAYRLVEKEKTSLDYKDKSSESASEAAASGSGDENVALVDDPFLQASEGRLVCSETPEKKISPAKISAESKTRRSLGTPKAQAQKPTPLKPCGGMKLNRGAQMGLGRTSGHALDSDVS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0120 668 Pfam Protein tyrosine and serine/threonine kinase 261 495 IPR001245 GO:0004672|GO:0006468
Vvi2g0120 668 SUPERFAMILY Protein kinase-like (PK-like) 250 524 IPR011009 -
Vvi2g0120 668 FunFam Kinase family protein 225 509 - -
Vvi2g0120 668 MobiDBLite consensus disorder prediction 564 584 - -
Vvi2g0120 668 PANTHER SERINE-THREONINE PROTEIN KINASE 230 501 - -
Vvi2g0120 668 ProSiteProfiles Protein kinase domain profile. 207 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g0120 668 Gene3D Transferase(Phosphotransferase) domain 1 243 516 - -
Vvi2g0120 668 MobiDBLite consensus disorder prediction 618 632 - -
Vvi2g0120 668 Pfam Protein of unknown function (DUF1221) 21 224 IPR010632 -
Vvi2g0120 668 MobiDBLite consensus disorder prediction 599 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0120 Vvi-Chr2 1064275 1066369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0120 245 503 MAP Kinase Kinase Kinase AT1G14000 32.234 8.07e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vvi2g0120 PK_Tyr_Ser-Thr 2.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0120 - - vvi:100251959 1321.22