Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0105 ATGGTTCAGAATTTACTCAGATTGAAGGAACCTGCTGTCTTATTGCGTTGTCGGAAAGATGACTTGCATTTGGTGGAATTTATCTTGGATTCAGCAAAGAATGAGTATGCAGAAAAAGCAAATGTTTATCCACCTGAAATAATAGTTGATCATCAAGTCTATCTTCTACCTGCTCCTAGCCATCATTCATGCCCATGGTCCCTTCTGGTAATTTTATTTAAGGAGAAATTTCCATAA 237 0.3713 MVQNLLRLKEPAVLLRCRKDDLHLVEFILDSAKNEYAEKANVYPPEIIVDHQVYLLPAPSHHSCPWSLLVILFKEKFP* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0105 78 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 2 63 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi2g0105 78 SUPERFAMILY V-type ATPase subunit E-like 2 48 - -
Vvi2g0105 78 Gene3D - 1 65 IPR038495 -
Vvi2g0105 78 Pfam ATP synthase (E/31 kDa) subunit 1 55 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0105 Vvi-Chr2 915291 916006 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0105 1 66 Primary Pumps ATPases(2) AT1G64200 59.420 2.81e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0105 K02150 - vvi:100246834 115.546