Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0090 ATGTCAACAAATGTGACTTGCCCACCACCCACCAAGGCCACATCAAATGGGGTGTTCCAGGGGGATAATCCCATTCATTTCGCCCTCCCTCTACTTATTGTGCAGATATGCCTTGTGCTTGTGGTTACTCGCTGTCTTGCTTTTCTTCTGAAGCCACTGCGACAGCCTCGCGTGATTGCAGAGATTGTTGGAGGAATATTACTTGGTCCTTCAGCTCTGGGTCGCAACAAACAGTATCTGCATTCGATTTTTCCACCTAAAAGCCTCACAGTGTTGGATACTCTGGCAAACCTTGGTCTTCTCTTCTTTCTATTCCTTGTAGGCTTGGAGTTGGATCTCAACTCCCTCCGTCGCACTGGAAAGAAAGCTCTTAGCATTGCTGTTGCAGGAATCAGCCTTCCTTTTGCTTTAGGAGTTGGTACATCTGTTGTCCTCAGAGCAACCATCTCCAAGGGTGTAGATGCAGGTCCATTTCTTGTATTCATGGGGGTGGCCCTCTCTATCACTGCCTTCCCTGTTTTGGCCCGTATCCTTGCAGAGCTAAAGCTTTTAACCACTGATGTTGGCCGAATGGCCATGTCTGCTGCTGCTGTCAATGATGTGGCTGCATGGATTCTACTTGCTCTTGCCATTGCTCTCTCTGGTACTGGCCGTTCCCCCATAGTAGCATTATGGGTGTTTTTGTGTGGATTTGGTTTTGTCCTTTGCTGTTCACTCATTGCCCCACGAATATTCAAATGGATGGCTCAGCGTTGCCCTGAGGGTGAGCCGGTGGATGAGATGTATGTATGTGCTACTTTAGCTGCTGTTTTGGCAGCTGGGTTTGTTACTGATGCCATTGGGATTCATGCGCTCTTTGGTGCTTTTGTGATGGGAATTCTCGTCCCCAAAGAAGGTCCTTTCGCAGGTGCTCTTGTGGAAAAAGTTGAGGACCTTGTATCTGGCCTCCTCCTTCCGTTGTACTTTGTCTCAAGCGGATTGAAGACTGATGTGGCCACCATTAGGGGGCTTCAATCATGGGGTCTCCTTGTTTTGGTCATATTTACAGCCTGTTTGGGGAAGATTGCAGGAACCGTTGCTGTCTCCCTTAGTTGGAGAATGCCTGTTCCGGAGGCTCTAGCTCTGGGGTTCCTAATGAACAGCAAGGGCTTGGTGGAGCTCATCGTCCTCAACATTGGTAAAGAGAGAAAGGTATTGAATGATCAAACATTTGCCATCATGGTTCTCATGGCTCTCTTCACAACCTTTATCACAACACCTCTAGTTATAGCAGTATACAAGCCGGCTAAAAGGACAAGTAAAGCCGATTACAATCACAGAACAATTGATAGAAAGAACCCCAATGCTGAACTTCGAATATTGGTTTGTTTCCAGAGTTCAAACAGCATTCCTACAATTATCAATCTCGTTGAGGCTTCACGGGGAACCGCGAAGAGGGAAGGACTTTGTGTCTATGCAATGCACCTCATGGAGCTGTCAGAGAGGTCATCTGCAATACTGATGGTTCACAAGGCAAGAAAGAATGGGCTACCCTTTTGGAACAAGGCCGTGCGCTCTGGTTCCAACCAATTAATTGTGGCGTTTGAGGCTTTCGGGCAGCTCAGCAGAGTGTCTATCAGGCCAATGACAGCAATTTCAGCCATGTCCAACATGCACGAGGACATCTGCACAAGTGCTGAAAGGAAAAGGGCAGCGATCATCATCCTCCCATTCCATAAGCACCAGAGATTTGATGGAACATTGGAGACTAGCAGAAGTGAATTCGGGGTGGTCAACAGAAAGGTCCTCGAGCATGCTCGATGCTCAGTTGGGATCCTAGTAGACCGCGACCTCGGTGGAACGGCCCAAGTATCTGCAAGCAACGTCTCCTCCATCATCACAGTCCCATTCTTTGGCGGCTGCGACGACCGTGAAGCCCTCTCGTACGGTGCACGCATGGCTGAGCATCCCGGCATTAGTCTAGTGGCCATTCGCTTCCTATTTCACCCAGACACCCTGGATGAGGCCATCACGCCTGATCCACACCCCAACCCCAACTCCAACTCCTCATTGGACGAAAACTTCCTGGCTGAATTCAAGAACAAGACGTCACACAACAGCTCAGTCAAATTGGAAGAAAGAGTCGTAAAAAATGCTGCAGAAGCCATCGAAATCATCCGCGAATACCACCGGTGCACCATGTTTGTTGTGGGCCGAACGCCAGAGGGTCAACTCGTTGCTGGATTGAGTCCACTGATCGAGTTCCCGGAACTGGGGCCGGTGGGCAGTTTGCTGACTTGTGGTGGCATTCCCACAGCTGCATCAGTGCTTGTTGTGCAGCAATATCAACCCAGGTCGTTTTCAAACTCAGATATTTCCTAA 2361 0.4909 MSTNVTCPPPTKATSNGVFQGDNPIHFALPLLIVQICLVLVVTRCLAFLLKPLRQPRVIAEIVGGILLGPSALGRNKQYLHSIFPPKSLTVLDTLANLGLLFFLFLVGLELDLNSLRRTGKKALSIAVAGISLPFALGVGTSVVLRATISKGVDAGPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGRSPIVALWVFLCGFGFVLCCSLIAPRIFKWMAQRCPEGEPVDEMYVCATLAAVLAAGFVTDAIGIHALFGAFVMGILVPKEGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVATIRGLQSWGLLVLVIFTACLGKIAGTVAVSLSWRMPVPEALALGFLMNSKGLVELIVLNIGKERKVLNDQTFAIMVLMALFTTFITTPLVIAVYKPAKRTSKADYNHRTIDRKNPNAELRILVCFQSSNSIPTIINLVEASRGTAKREGLCVYAMHLMELSERSSAILMVHKARKNGLPFWNKAVRSGSNQLIVAFEAFGQLSRVSIRPMTAISAMSNMHEDICTSAERKRAAIIILPFHKHQRFDGTLETSRSEFGVVNRKVLEHARCSVGILVDRDLGGTAQVSASNVSSIITVPFFGGCDDREALSYGARMAEHPGISLVAIRFLFHPDTLDEAITPDPHPNPNSNSSLDENFLAEFKNKTSHNSSVKLEERVVKNAAEAIEIIREYHRCTMFVVGRTPEGQLVAGLSPLIEFPELGPVGSLLTCGGIPTAASVLVVQQYQPRSFSNSDIS* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0090 786 PANTHER CATION/H + ANTIPORTER 6 777 - -
Vvi2g0090 786 FunFam Cation/H(+) antiporter 15 31 433 - -
Vvi2g0090 786 Gene3D - 31 436 IPR038770 -
Vvi2g0090 786 Gene3D - 450 742 - -
Vvi2g0090 786 Pfam Sodium/hydrogen exchanger family 38 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0090 Vvi-Chr2 809312 812187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0090 1 776 Antiporter Super Family AT5G41610 66.539 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0090 - - vvi:100248364 1479.92