Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0089 ATGGCAACAAATGTGACTTGCCCACCGCCCACCGCCCACCGCCCACCACCCACCAAGGCCACATCAAATGGGGTGTTCGAGGGGGATAATCTCATTCATTTTGCTCTCCCTCTAGTTATTGTGCAGATATGCCTTGTAGTTGTGGTTACTCGCTGTCTTGCTTTTCTTCTGAAGCCACTGCGAGAACCTCGTGTGGTAGCAGAGATTATTGGAGGAATATTGCTTGGTCCATCAGCTCTGGGTCGCAACAAAAACTATTTGCATACGATTTTTCTACCTCAAAGCCTCACAGTGTTGGATACTCTGGCAAACCTTGGTCTTCTCTTCTTTCTATTCCTTGTAGGCTTAGAGTTAGATCTCAACTCCCTCCGTCGCACTGGAAAGAAAACTCTTAGCATTGCTGTTGCGGGAATCAGCCTTCCTTTTGCTTTAGGAGTTGGTATATCTGTTGTCCTCAGAGCAACGATTTCCAAGGGTGTAGATGAAGGTCGTTTCTTGTATTCATGGGGGTGGCCCTCTCTCTGTCACTGCCTTCCCTGTTTTGGCTCGTATCCTTGCAGAGCTCAAGCTTTTAACAACTGA 582 0.4759 MATNVTCPPPTAHRPPPTKATSNGVFEGDNLIHFALPLVIVQICLVVVVTRCLAFLLKPLREPRVVAEIIGGILLGPSALGRNKNYLHTIFLPQSLTVLDTLANLGLLFFLFLVGLELDLNSLRRTGKKTLSIAVAGISLPFALGVGISVVLRATISKGVDEGRFLYSWGWPSLCHCLPCFGSYPCRAQAFNN* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0089 193 PANTHER CATION/H + ANTIPORTER 16 170 - -
Vvi2g0089 193 MobiDBLite consensus disorder prediction 1 20 - -
Vvi2g0089 193 Pfam Sodium/hydrogen exchanger family 44 151 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi2g0089 193 Gene3D - 38 166 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0089 Vvi-Chr2 807300 808096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0089 15 170 Antiporter Super Family AT4G23700 65.385 1.26e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0089 - - vvi:100248364 243.432