Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0087 ATGGCTACCAATTCTTCAGCTGGGCATGCATGTCCATCTCCGATGAAGTCGGTGTCTAATGGCATTTTTCAAGGGGATAATCCTCTTCATTTTGCGCTCCCTCTTGCCATTTTGCAGATTTGCCTGGTGCTTGTTGTTACACGAGGTCTTGCTTATCTTTTCAGACCGCTAAGGCAGCCACGAGTGATTGCAGAGATTGTGGGAGGAATACTACTTGGGCCATCAGCTCTGGGTCGAAGCGAGAGCTATCTGCACGCAGTATTCCCATCACAAAGCCTCACAGTGTTGGACACTCTAGCCAACCTTGGACTCCTGTTCTTTCTATTCCTTGCAGGCCTAGAGTTGGATCCTAAGTCTCTTCGTCGAACTGGAAAGAAAGCCCTTGGAATTGCCATCGCCGGAATCAGCCTCCCTTTTGCATTAGGAATTGGCACATCATTTGTTCTCCGAGAAACCATAGCCAAAGGGGTCAATGGGACCTCCTTTCTTGTATTCATGGGTGTCGCACTTTCCATAACTGCCTTCCCTGTCTTAGCCCGTATATTAGCTGAGCTGAAACTTTTAACTACTGATGTTGGCAGAATGGCAATGTCAGCTGCAGCCGTTAATGATGTGGCTGCATGGATTCTACTTGCTCTTGCTATTTCCTTATCTGGCAGTAAACAGTCTCCCATTGTGCCATTCTGGGTTCTCTTATGTGGGTGTGGCTTTGTTATTTGTGCGAGTCTCATTCTCCCACCAATATTCAAATGGATGGCCAGGCGATGCCATGAAGGTGAGCCAGTGGATGAGATGTATATATGTTCTACATTAGCTGTTGTTCTGGCAGCTGGGGTTGTTACTGATGCCATTGGGATCCATGCCATGTTTGGGGCTTTTGTGGTTGGAATTCTGGTCCCAAAGGAAGGGCCATTTGCAAGCGCTCTTCTGGAGAAAGTTGAAGATCTTGTATCTGGCCTCTTTCTGCCACTTTACTTTGTCTCCAGTGGATTGAAAACCAATGTAGCTACAATTCAAGGGCTTCAGTCATGGGCTCTCCTGGTCTTGGTCATATTTACAGCCTGCATTGGGAAAATTGTGGGCACTGTTGTGGTTTCCCTTTCATTCAAAATGCCTCTGCGTGAAGCTCTGGCACTGGGGTTCCTAATGAACAGTAAAGGCTTGGTGGAGCTCATTGTCCTCAACATTGGTAAAGATCGAAAGGTATTAAATGACCAGACATTTGCCATAATGGTTCTAATGGCTCTTTTTACAACATTTATCACCACACCTCTAGTCGTGGCTGTGTATAAGCCAGCTAAAAGGGAAAGAAACACTGACCACAAGCAAAGAACAGTTGAAAGGAAAAACACAAACACTGAGCTTAGAATTATGGCATGTTTCCATGGTGCAAGAAATATCCCATCAATGATAAATCTCTTTGAGGCCTCAAGGGGGACCAACAAGCATGAGGGACTTTGCATATATGCAATGCATCTAATGGAGTTCTCTGAGAGATCGTCAGCTATAATGATGGTACACAAGGTGAGGAAGAATGGACTACCCTTTTGGAACAAGGGTGTTCGATCAGAGTCCAACCAGATTGTTGTGGCTTTTGAGGCTTTCCAGCAGCTAAGCCAAGTGTCTGTCCGGCCAATGACTTCCATATCTTCAATATCTGACATGCACGAGGACATTTGTACCACTGCTGATAGGAAGAGGGTTGCTATAATCATTCTACCATTCCACAAGCACCAGAGGGTGGATGGCTCACTTGAGACTACACGAACAGACTTCCGTTGGGTTAACCGTAGGGTTCTTGAACATGCAGCCTGCTCAGTTGGGATCCTAGTAGACCGCGGGCTTGGTGGTACCACCCATGTATCAGCAAGTAATGTTTCTTATTTCATCACAGTACTCTTCTTTGGTGGCCATGATGACCGTGAAGCTCTTGCTTATGGGATTCGCATGGCTGAGCATCCTGGTATCAATTTAATGGTCATTCGCTTCTTAGTTGAGCATGAGACTGCAGAGGGGATTGAGTTAGTTGATGGAAATTCCAAACCTGATGAGGAGTGTCTCGCTGAGCTCAAGCAGAAGATATCCAAAGATGGCTCCATAAAATATGAGGAGAAAGAAGTCAGAAGTGCTGCAGAAACCATTGCTGCAATTCGTGAGGCTAGTTTCTGCAACCTGTTCCTGGTGGGTCGAGCTCCTGATAAGGCGGCCATTCCCCTTCCTCTAGATAGGAGAAGCGAGTGTCCAGAATTGGGGCCTTTGGGGAGTTTGTTGGCTTCAACAGATTTCTCAACAGCGGCATCAGTTTTGGTGATCCAACAGTACCATGGTAGTGTATCTCCAAATTTGGCCTTAGACCTGGAGGAAGGATTGCCTGATTCCGAATCTAACTGA 2391 0.463 MATNSSAGHACPSPMKSVSNGIFQGDNPLHFALPLAILQICLVLVVTRGLAYLFRPLRQPRVIAEIVGGILLGPSALGRSESYLHAVFPSQSLTVLDTLANLGLLFFLFLAGLELDPKSLRRTGKKALGIAIAGISLPFALGIGTSFVLRETIAKGVNGTSFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAISLSGSKQSPIVPFWVLLCGCGFVICASLILPPIFKWMARRCHEGEPVDEMYICSTLAVVLAAGVVTDAIGIHAMFGAFVVGILVPKEGPFASALLEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWALLVLVIFTACIGKIVGTVVVSLSFKMPLREALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVVAVYKPAKRERNTDHKQRTVERKNTNTELRIMACFHGARNIPSMINLFEASRGTNKHEGLCIYAMHLMEFSERSSAIMMVHKVRKNGLPFWNKGVRSESNQIVVAFEAFQQLSQVSVRPMTSISSISDMHEDICTTADRKRVAIIILPFHKHQRVDGSLETTRTDFRWVNRRVLEHAACSVGILVDRGLGGTTHVSASNVSYFITVLFFGGHDDREALAYGIRMAEHPGINLMVIRFLVEHETAEGIELVDGNSKPDEECLAELKQKISKDGSIKYEEKEVRSAAETIAAIREASFCNLFLVGRAPDKAAIPLPLDRRSECPELGPLGSLLASTDFSTAASVLVIQQYHGSVSPNLALDLEEGLPDSESN* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0087 796 PANTHER CATION/H + ANTIPORTER 10 775 - -
Vvi2g0087 796 Gene3D - 35 441 IPR038770 -
Vvi2g0087 796 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi2g0087 796 FunFam Cation/H(+) antiporter 15 35 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0087 Vvi-Chr2 798757 802286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0087 1 796 Antiporter Super Family AT5G41610 70.654 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0087 - - vvi:100263862 1501.11