Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0080 ATGTACTCCAGGTTCCAGAATTTGGGCTTTGCTGCTAACCATTCCTCAAATGCATTCAAAAATCTGGGCAATTCCATGCAAGTTGGAGGAGCCAGAGCCAACTATTGCATGGATACTATCCTGCGACTTGATTCCCCCAGTTCTTCGATTCCTGACTTGACTGCATCAAAGGGGGTCAAACGGAAGTGGAGTTTGATTGATGGAACCAGGGGCCAGCAAGTTGGTTCTTCACTGTCTCTTGGGCTAGGGCGTTCATCAAGTTCCTCAGACAGCAAAGGGAGTTCAGCCACTGCTTGCACTACAATGTCCTCAGCCAAAGAAAATGAAGAGGAGTCCTCTATGGATCTTGAATTGGACTTCACTCTGCATCTAGGCAACGAGAAAACACCCAGCACAAAGAAATATGCTGGCTCAAGTCTGAAAGCACTGGAACTGCAGACAGATATTGACCTGGAGTTGAGTCTCTCTACTGGGCCTGCCGAATCCGATATCACTAGTATCCATGCAAGCTCTACTCTACTTCACGCCATGGATATGCCACTGGGAGTTGCCAGAGCTGCGCATCTAGATGAAGGCTCAACATCATCTCCATGGAAACCAGGGACTTCTTTGTCATCATCATTGCATGCTCCATTGATCAAAAAGACTAGCTTATTTTCCCATCAGATTCCACAAAGAATGGACCCAACTTCCCCAGTTCCGGACCTTTCATCAAGCATAATAACAACACCAAAAAGCTCAGTCACCTGTACTTCCGGGATAACACAGCAGCAACCACAACGCAGCACTAGTTCAAAGACTTGTCAGTTCAAGGGATGTGGAAAGGGAGCAAGAGGTGCTTCTGGCCTTTGTATTGCCCATGGAGGTGGTCGGAGGTGCCAGAAAACTGGATGTCATAAGGGAGCTGAGGGCCGTACAGTGTACTGCAAGGCACATGGGGGTGGCCGGCGATGTGAATTCCTTGGGTGCACAAAGAGTGCAGAAGGACGAACAGATTACTGCATTGCTCATGGTGGTGGCAGGCGATGCAGTCATGAGGGTTGCACTCGAGCTGCAAGAGGGAAATCAGGATTGTGCATCCGGCATGGTGGGGGGAAGAGATGCCAGAAGGAGAACTGCACGAAGAGTGCAGAAGGCCTCTCAGGTCTCTGCATCTCACACGGAGGTGGGCGTCGTTGCCAGTTCCCAGCATGCACAAAAGGGGCACAAGGAAGCACAATGTATTGCAAGGCCCATGGTGGGGGAAAACGGTGCACAGTTCCAGGTTGCACCAAGGGCGCAGAAGGGAGCACCCCCTTCTGCAAGGGGCATGGTGGAGGGAAAAGGTGTTCATTTCAAGGTGGTGGGATTTGCCCAAAGAGTGTTCATGGAGGGACCAACTTCTGCGTGGCACATGGGGGCGGCAAGAGGTGTGCAGTGCCAGAATGCACAAAGAGCGCAAGGGGACGAACTGACTATTGCGTCCGCCATGGAGGGGGCAAGAGATGCAAATCTGAAGGCTGTGGCAAGAGTGCACAAGGCAGCACGGACTTCTGCAAGGCACATGGTGGAGGGAAAAGATGCTCTTGGGGTCAGGTTGGGTCACAATTTGGCAGCCAAGATGGACCTTGTAGTTCATTTGCCAGGGGGAAGACTGGGCTCTGTGCATCACACAATGCCCTGGTGCAAGACAAGCGAGTCCACGGGGGTGCCACTCTGGCACATACTGTCCAGATCCCCTCACCCAGCAAGCCTGAGAAGATGAAAGATGTTGTCGCTACTGAAGACATGAATGTCGATATCATGAAGATGATGGGGAGTAGCATAGTGAACCCAGCTGGCTGGACTGGTCTTGAATTGAAACAAGTAGGACTTCCACAACCTCACCTCCCAGCCAGAGAAGTAAGACCATCACCAGTTCCAGTATTAGCTCCAGAAGGTAGGGTGCATGGGGGAAGTCTGATGGCCATGCTGGCAGGCAGTCCCGGTCTCAGTCCAAGTGACAGCAAAACCCTCATCAGCGGCGGTCCATCTGAACCTAGGAAACCATACATGATGCCCCAGAGCTGGATGTAA 2055 0.5168 MYSRFQNLGFAANHSSNAFKNLGNSMQVGGARANYCMDTILRLDSPSSSIPDLTASKGVKRKWSLIDGTRGQQVGSSLSLGLGRSSSSSDSKGSSATACTTMSSAKENEEESSMDLELDFTLHLGNEKTPSTKKYAGSSLKALELQTDIDLELSLSTGPAESDITSIHASSTLLHAMDMPLGVARAAHLDEGSTSSPWKPGTSLSSSLHAPLIKKTSLFSHQIPQRMDPTSPVPDLSSSIITTPKSSVTCTSGITQQQPQRSTSSKTCQFKGCGKGARGASGLCIAHGGGRRCQKTGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFPACTKGAQGSTMYCKAHGGGKRCTVPGCTKGAEGSTPFCKGHGGGKRCSFQGGGICPKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGKRCSWGQVGSQFGSQDGPCSSFARGKTGLCASHNALVQDKRVHGGATLAHTVQIPSPSKPEKMKDVVATEDMNVDIMKMMGSSIVNPAGWTGLELKQVGLPQPHLPAREVRPSPVPVLAPEGRVHGGSLMAMLAGSPGLSPSDSKTLISGGPSEPRKPYMMPQSWM* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0080 684 MobiDBLite consensus disorder prediction 655 684 - -
Vvi2g0080 684 MobiDBLite consensus disorder prediction 76 107 - -
Vvi2g0080 684 PANTHER EMB|CAB89363.1 265 302 - -
Vvi2g0080 684 MobiDBLite consensus disorder prediction 76 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0080 Vvi-Chr2 758266 760320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0080 391 551 WRKY Transcription Factor Family AT4G12020 53.416 6.85e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0080 - - vvi:100255255 1392.48