Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0074 ATGGATATTGCATCGAGGGGAAGAGATTGTTCTTGCAATCCTCCAAAGATTCGGAGAAATGCCTCTGCCTCAGCTAATATGAATAACATGGCCTCACAATTTGCACCATATCCAGCACCACTCAAGCGCACAAGCAGCTGGTCTTTTGATGAGAAGCTTCTTATACAGTCCCTTTACAAGGTTCTGGTTTCGGTTTCAAAAACCAGCCCACTTGTTCTATATATTAGAGATGTTGAGAAGCTTCTATCTAGATCACAGAGGATATACAACTTGTTCCAGAAAATGTTGAACAAACTTTCAGGATCAATACTGATCCTTGGCTCACAAATCATAGATCCGGATGATGACTACGGAGATGTGGATCAGAGGCTTACTGCTCTATTCCCTTACAACATTGAAATCAGACCACCTGAAGATGAAAACCACTTTGTTAGTTGGAAGACTCAACTGGAGGAGGATATGAAAATGATACAGCTTCAGGATAACAAAAACCACATCATTGAAGTACTTGCCGCGAATGATCTTGACTGTCGAGATCTTGATTCGATCTGCCTGGAAGACACCATGGTTCTCAGTAACTACATAGAAGAAATTGTGGTGTCAGCAGTTTCTTATCATTTGATGAATAACAAAGATCATGAATACAAAAATGGGAAACTTGTTATTTCATCCAAGAGTTTGGCCCATGGGTTGAGTCTATTCCAGGAAGGTAAGTCTGGCAGCAAAGATACTTCGAAACTCGAAGCGCATGCTGAACCTTCTAAGGAAGCTGGGGGAGAAGAAGGTGCTGGTGTGAAGCCAGCAGCAAAAGCTGAAAGCACAGCTCCAGAAAACAAAAATGAAGCAGGGTCACTTATCGTGGCAGTAAAGGAGGGTGACAATCCAATCCCAGCATCAAAAGCTCCAGAAGTTCCTCCTGACAATGAATTTGAGAAGCGCATCAGACCAGAGGTCATCCCAGCTAGTGAGATTGGTGTGACATTTGCTGATATTGGTGCCATGGATGAGATTAAAGAATCCCTCCAGGAACTTGTAATGCTTCCTCTTCGTAGACCAGACCTTTTTGAAGGAGGCCTTCTAAAGCCTTGCAGAGGAATATTGCTCTTTGGGCCTCCTGGCACTGGGAAAACAATGTTAGCCAAGGCCATTGCCAATGAAGCTGGAGCAAGCTTCATTAATGTGTCCATGTCTACCATCACTTCCAAATGGTTCGGTGAAGATGAGAAGAATGTTCGTGCCTTGTTCACTCTGGCAGCCAAGGTTTCCCCAACTATTATTTTTGTAGATGAGGTTGATAGCATGCTTGGACAGCGGACTAGAGTTGGGGAGCATGAAGCCATGCGGAAGATAAAAAATGAGTTCATGACTCATTGGGATGGACTCTTGACAAAACCGGGTGAGCGGATTCTTGTTCTTGCTGCAACTAACAGGCCATTTGACCTTGATGAAGCCATAATCAGACGCTTTGAGAGGAGGATCATGGTTGGCCTACCATCGGTGGAGAACAGAGAAATGATCATGAAGACTCTTTTGTCAAAAGAAAAAGTTGCAGAAGGATTAGATTTCAAGGAGCTTGCAACCATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACCTGTGCACAACAGCTGCTTATCGGCCAGTCAGGGAGTTAATACAGCAAGAGAGACTTAAGGATTTGGAGAAAAAACGGAGAGCTGAGCAAAGGCTAAGTCCCGACGATGATGACGTGTTTGAAGATACAGAGGAAAGAGTAATTACCCTGAGGCCATTAAACATGGAAGACTTCAGACACGCAAAGAATCAGGTTGCGGCAAGCTTTGCTGCAGAGGGATCGATAATGAGTGAGCTGAAGCAGTGGAACGACTCGTATGGGGAAGGAGGTTCGAGGAAGAAGCAGCAATTATCTTACTTCCTATAA 1923 0.4394 MDIASRGRDCSCNPPKIRRNASASANMNNMASQFAPYPAPLKRTSSWSFDEKLLIQSLYKVLVSVSKTSPLVLYIRDVEKLLSRSQRIYNLFQKMLNKLSGSILILGSQIIDPDDDYGDVDQRLTALFPYNIEIRPPEDENHFVSWKTQLEEDMKMIQLQDNKNHIIEVLAANDLDCRDLDSICLEDTMVLSNYIEEIVVSAVSYHLMNNKDHEYKNGKLVISSKSLAHGLSLFQEGKSGSKDTSKLEAHAEPSKEAGGEEGAGVKPAAKAESTAPENKNEAGSLIVAVKEGDNPIPASKAPEVPPDNEFEKRIRPEVIPASEIGVTFADIGAMDEIKESLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMIMKTLLSKEKVAEGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERLKDLEKKRRAEQRLSPDDDDVFEDTEERVITLRPLNMEDFRHAKNQVAASFAAEGSIMSELKQWNDSYGEGGSRKKQQLSYFL* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0074 640 MobiDBLite consensus disorder prediction 241 259 - -
Vvi2g0074 640 Pfam AAA+ lid domain 520 562 IPR041569 -
Vvi2g0074 640 ProSitePatterns AAA-protein family signature. 469 488 IPR003960 GO:0005524|GO:0016887
Vvi2g0074 640 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 40 639 - -
Vvi2g0074 640 SMART AAA_5 362 499 IPR003593 GO:0016887
Vvi2g0074 640 MobiDBLite consensus disorder prediction 237 281 - -
Vvi2g0074 640 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 325 500 - -
Vvi2g0074 640 Gene3D - 498 578 - -
Vvi2g0074 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 326 576 IPR027417 -
Vvi2g0074 640 Pfam ATPase family associated with various cellular activities (AAA) 366 496 IPR003959 GO:0005524|GO:0016887
Vvi2g0074 640 Gene3D - 325 497 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0074 Vvi-Chr2 709763 714295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0074 326 558 Calmodulin-binding Proteins AT3G56690 38.136 5.76e-44 167