Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0036 ATGGCGACAGGAATTTCGGCTTCTTTAAACTCCATGTCGTGCCGTTTGGGCCGGAATAGTTTCACAGCCACCGGACCCAGCTCGGTGATAAGTTTGTCGTCTTTCTTAACTCCGGTGACCCACTTGAAGGGGAATATTTTTCCTCTGCAGAGAAGGAGGAGCTTGAAGGTGTGCTTGGTCCTGGAGAAGAAAATTGAAGATGGTATTGAAATTGAGGACGACAGTCCGGAAAGCTCGAACAGGGCCTCTGAGAGACTAGCGAGGAAGAAAGCGGAAAGATACACTTATCTTGTTGCTGCTATGATGTCTAGCCTCGGCATCACTTCAATGGCTATCGTTGCTGTCTACTACAGATTTTCTTGGCAAATGGAGGGTGGAGAAATCCCAGTTCTGGAAATGTTGGGTACATTTGCTCTTTCTGTGGGAGCTGCTGTGGGGATGGAGTTTTGGGCGCGGTGGGCTCACAAAGCGCTCTGGCATGCTTCACTGTGGCATATGCACGAGTCTCACCATCGACCCAGAGAAGGTCCTTTCGAGCTCAACGATGTGTTTGCCATCATCAATGCCGTCCCGGCAATATCTCTGCTCTCCTATGGCCTCTTCAACAAAGGCCTCGTCCCAGGTCTCTGTTTCGGAGCTGGACTAGGAATAACAGTGTTTGGCATGGCCTACATGTTTGTCCACGACGGCCTTGTCCACCGTCGATTCCCTGTCGGACCCATCGCCAACGTCCCTTATCTACGAAAAGTAGCTTCGGCCCACCAACTTCATCACTCTGACAAATTTAATGGAGTTCCATACGGGCTGTTCTTGGGACCCATGGAGCTGGAAGAGGTGGGAGGCATGGAAGAGTTGGAAAAGGAGATCAATAGAAGAATTAAATCATCTGACTCTTCATGA 900 0.4989 MATGISASLNSMSCRLGRNSFTATGPSSVISLSSFLTPVTHLKGNIFPLQRRRSLKVCLVLEKKIEDGIEIEDDSPESSNRASERLARKKAERYTYLVAAMMSSLGITSMAIVAVYYRFSWQMEGGEIPVLEMLGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAISLLSYGLFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYLRKVASAHQLHHSDKFNGVPYGLFLGPMELEEVGGMEELEKEINRRIKSSDSS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0036 299 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 296 IPR045019 GO:0016491
Vvi2g0036 299 Pfam Fatty acid hydroxylase 143 271 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0036 Vvi-Chr2 360270 361917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0036 48 213 Chloroplast and Mitochondria Gene Families AT4G25700 68.539 1.23e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0036 K15746 - vvi:100232875 570.466