Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0005 ATGGATCCAGAAGCGGGAGTATACTTGGAGGAATCATATGACAGAACCCTATGCAACTCCAAGATTGCAGTGGCTGTGGCTGTGATGGAAGAGTGCTTCGAACCGGTCATTGATAGACACACACAAATCAATGTGGTTCGAAGTGTGATTTACAACTGCGGAGCAAATTTCCCACGAATAAGTTTCGAGGGATTTTACACAGCTATTCTTGAGAAAGGCGATGAAACGATATCGGTGGCATCCATGAGGATTCATGGGAATAAGCTTGCCGAGATGCCTTTTATTGCAACCCGCCCAAGCTACAGGCGCCAAGGAATGTGCCATAAACTGCTGGTGGCAATTGAGTCTGTAAGTTCCTTGCACATAAATATATTGAAATAA 381 0.4462 MDPEAGVYLEESYDRTLCNSKIAVAVAVMEECFEPVIDRHTQINVVRSVIYNCGANFPRISFEGFYTAILEKGDETISVASMRIHGNKLAEMPFIATRPSYRRQGMCHKLLVAIESVSSLHINILK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0005 126 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 60 116 IPR016181 -
Vvi2g0005 126 PANTHER PHD FINGER PROTEIN 12 12 118 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0005 Vvi-Chr2 79688 80318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0005 1 125 PHD Transcription Factor Family AT1G05380 53.968 8.54e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0005 - - vvi:104881044 236.113