Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0004 ATGTCTTGCATTGAAATAGTCCCCAAAAAGGAAAACAGATACATACTAGTCCAAAAGGCGATCTTCACAGTAACTGAAAATTTCTCTTGCCCATTTTGCTTGATGCAATGTGCGAGCTTTAAGGGCCTGCGTTATCACTTATGCTCCTCACATGATCTATTCAACTTTGATTTCTGGGTGACGGAAGAATACCAAGCTGTGAATGTCTCTGTGAAAGTTGATATCTTAAGATCTGAGATCATGGCAGATGGAGTAGACCCACGATTGCAAACATTCTTCTGGTGCTCAAAGCCACACAAACGTAGAAGACTGAAGAACCAAGTTCAAAATGCAAACCATGTTTTTCTGCATTTCTTGGAGTCGGGCTCACCCAATTTTTTCAGTGAAGCACACAAGGGATTTCTGGAAAAGGATGATGATGCTCTTTCCTGTGAAGGTGAAAAGTCTTCCATGTCATTACCCTGTCAGAAAGATTTGCAGAATGCAAGGCCTGTTGCAGAAAGCTATGCTATTGGTAAACCTAGTGCTGTTGAATGCATTGAACGTGTTGCATCAAACCTCAATGAGACAGGTGTTCCAATTGCCATGGCTCAATCTTCTGTGGACATGGAATGTGTTCAATCAATATCTGGAAGTCCTACGCCCCCGGCCGTGCTACAGTTTCCAAAAACAAGGAAGTTATCCTTTGAACGGTCAGAACCTAGAAATCGTACACTCCTGCAGAAGCGTCAGTTCTTTCACTCTCATAGAGCTCAGCCGATGGCTTTAGATCAAGTATTGTCAGATCGGGATAGTGAGGATGAGGTTGATGATGACATTGCAGATTTTGAAGATCGAAGGATGCTTGATGATTTCGTTGATGTTACCAAAGACGAGAAGCAGTTTATGCATCTTTGGAACTCATTTGTGAGGAAACAGAGGGTGCTGGCTGATGGTCACATTCCTTGGGCTTGTGAGGCATTTTCAAAACTTCATGGGCAGGAGCTGGTCCAGGCTCCAGCTATCTTTTGGTGTTGGAGGTTATTCATGATCAAACTCTGGAATCATGGTCTTCTTGATGCCCGCACAATGAATAGCTGTAACTTAGTTCTCGAAGGATACCGAAATGAGGTTTCAGATACTATGAAAAGCTGA 1134 0.4295 MSCIEIVPKKENRYILVQKAIFTVTENFSCPFCLMQCASFKGLRYHLCSSHDLFNFDFWVTEEYQAVNVSVKVDILRSEIMADGVDPRLQTFFWCSKPHKRRRLKNQVQNANHVFLHFLESGSPNFFSEAHKGFLEKDDDALSCEGEKSSMSLPCQKDLQNARPVAESYAIGKPSAVECIERVASNLNETGVPIAMAQSSVDMECVQSISGSPTPPAVLQFPKTRKLSFERSEPRNRTLLQKRQFFHSHRAQPMALDQVLSDRDSEDEVDDDIADFEDRRMLDDFVDVTKDEKQFMHLWNSFVRKQRVLADGHIPWACEAFSKLHGQELVQAPAIFWCWRLFMIKLWNHGLLDARTMNSCNLVLEGYRNEVSDTMKS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0004 377 CDD VEFS-box_EMF2-like 240 367 - -
Vvi2g0004 377 PANTHER POLYCOMB GROUP PROTEIN 22 373 - -
Vvi2g0004 377 Pfam VEFS-Box of polycomb protein 227 361 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0004 Vvi-Chr2 59724 77831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0004 24 365 C2H2 Transcription Factor Family AT5G51230 59.249 4.00e-120 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0004 - - vvi:100245153 707.212