Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1530 ATGGAGAAGCCCCCTCCTGAGAAATCCGGTAGTTTCTCCGGACACAATGTCGAGTCCCATCCACCGGAGTCAGAGGCTGAAGGAGAACTTGAGGATAGGGAAAATGCGAAGGAGTCTTCCTCCATTTCCGATTCAGCCCTACCTCAAGTTTCTCAGGACATTGATGGGTTTCTCTCCCATCTGTCTCTTCATGACGACAAATCTAACCCTCCGGACGTGCCGGATTCGGTTGAGGTGTTTTGTAAGCTGGTGGAGGCAATGATCGGAAACTACGATTCCGGTGATAGTTCTGCGAGGTTTGGTCAAGTTCCAGAGGAAGATACAGCGTTTGTAGAGTCGGTGGGGCGAATTTCTAAGCTGATGAATGCTCTGCGTGGTTTCCCGGTGGAGTCGCCCGCTGCAGCAATGTACGGACGTTCCGGGAGTGTTCTGCAACGAGCAATGTCGTTCCTGGAGGATGAGCTCCGGACACTTCTAGAAGATTCTAGAAGCCATATTTCCGATTCTAAGAGTTTGAAGACGAAGCATCCGTCGTTCAACTCCAAAGAAGATCACGATCGGTGTCCGCTGCCTGAATCTGAGTCCACCGGCGATGATGAGTATCCGGCGTACCCGCCGGAGGTCGTCGCCAGCATGAAGAAAATTGCGATGGCCATGATCTCCGCAGGGTACGAGACAGAGTGTTGCCAGGTTTTCAGCATTCTCAGGCGTAACGCGTTCAAGGAGGCAATCAACAAGCTGGGGTTTGACAGTATCAGCATCGACGATGTGCAGAAGATGCACTGGGAAACTCTGGAAGGAGAGATTGCGAAATGGATCAAAGTCGTGAAGCACTGCTCCCTCATCCTCTTCCCCGGCGAACGGCGATTCGCTGAATCGGTCTTCGAGGACTATCCAGAGATATTCAGCAGCCAATTCAGCAACCTAGCACGTGCTACCGTGATACATTTCCTCAATTTCGCAGAAGCGGTGGCAATGACGAAGCGATCGGCAGAGAAGCTGTTCAAATTCCTGGACATGTACGAGTCCTTGCGAGATCTGGTTCCGGCCATCAGCAGCCCGACCTCCGACGACAACGGACACGAACTCAAATCGGAGACAATGACGGCCGGAAGCCGCCTCGGGGAAGCCGCAGTGAGCATTTTCTGCGATCTGGAGAACTCAATCAAAAGCGACGTCAGCAAAACTCCTGTCCCAAGCGGTGCAGTTCACCCCCTGACTCGCTACACCATGAACTACCTGAAATACGCCTGCGAGTACAAAGACACCTTGGAAGAAGTCTTCCAACAGCACCAGAAAATCGAGCGCACCGACGAAGCAGGTTCCGACGTCGATGAGCGGTCCAGCCAAAACAACTCCCGACTGCCGGTGAAGCAAACGCCATTCGCAACACAGCTAATCGCAGTGATGGACCTCCTGGACTCGAATCTCGACACCAAATCCAAGCTCTACAAAGACATGTCACTGCGCTACATTTTCCTGATGAACAATGGCAGGTACATTCTCCAAAAGATCAAAGGCTCATCAGAGATCCACGAGGTGATGGGAGACACCTGGTGCCGGAGGCGATCTTCGGATCTGAGGCAGTACCACAAGAACTACCAGAGAGAGACGTGGAGCAAAGTGTTGCAGTGCTTGAGAGACGAAGGCCTACAAGTGAACGGAAAAGTGAACAAGCCAGTGCTGAAGGAGAGGTTCAAGACCTTCAACACCTTGTTTGATGAGATCCACAAGACTCAAAGCACTTGGGTGGTGAGCGACGAGCAGCTTCAGTCGGAGCTTCGAGTGTCCATCTCTGCAGTGATGATTCCAGCTTACCGATCATTCCTAGCGCGGTTCAGCCAGTACTTGGACTCCGGGCGGCAGACAGAGAAATACGTAAAGTATCAACCAGACGATATCGAGACCTCCATTGATGAATTGTTTGATGGAAACCCTACATCGATGACAAGGAAGAGAACATGA 1965 0.5186 MEKPPPEKSGSFSGHNVESHPPESEAEGELEDRENAKESSSISDSALPQVSQDIDGFLSHLSLHDDKSNPPDVPDSVEVFCKLVEAMIGNYDSGDSSARFGQVPEEDTAFVESVGRISKLMNALRGFPVESPAAAMYGRSGSVLQRAMSFLEDELRTLLEDSRSHISDSKSLKTKHPSFNSKEDHDRCPLPESESTGDDEYPAYPPEVVASMKKIAMAMISAGYETECCQVFSILRRNAFKEAINKLGFDSISIDDVQKMHWETLEGEIAKWIKVVKHCSLILFPGERRFAESVFEDYPEIFSSQFSNLARATVIHFLNFAEAVAMTKRSAEKLFKFLDMYESLRDLVPAISSPTSDDNGHELKSETMTAGSRLGEAAVSIFCDLENSIKSDVSKTPVPSGAVHPLTRYTMNYLKYACEYKDTLEEVFQQHQKIERTDEAGSDVDERSSQNNSRLPVKQTPFATQLIAVMDLLDSNLDTKSKLYKDMSLRYIFLMNNGRYILQKIKGSSEIHEVMGDTWCRRRSSDLRQYHKNYQRETWSKVLQCLRDEGLQVNGKVNKPVLKERFKTFNTLFDEIHKTQSTWVVSDEQLQSELRVSISAVMIPAYRSFLARFSQYLDSGRQTEKYVKYQPDDIETSIDELFDGNPTSMTRKRT* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1530 654 PANTHER EXOCYST COMPLEX PROTEIN EXO70 87 644 IPR004140 GO:0000145|GO:0006887
Vvi1g1530 654 SUPERFAMILY Cullin repeat-like 104 643 IPR016159 -
Vvi1g1530 654 MobiDBLite consensus disorder prediction 1 49 - -
Vvi1g1530 654 MobiDBLite consensus disorder prediction 166 203 - -
Vvi1g1530 654 FunFam Exocyst subunit Exo70 family protein 93 650 - -
Vvi1g1530 654 MobiDBLite consensus disorder prediction 435 454 - -
Vvi1g1530 654 MobiDBLite consensus disorder prediction 166 194 - -
Vvi1g1530 654 Gene3D Exocyst complex component Exo70 97 652 - -
Vvi1g1530 654 MobiDBLite consensus disorder prediction 20 39 - -
Vvi1g1530 654 Pfam Exo70 exocyst complex subunit 271 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1530 Vvi-Chr1 21941247 21943211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1530 7 653 EXO70 exocyst subunit family AT5G13150 50.822 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1530 K07195 - vvi:100259218 1305.43