Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1492 ATGAAAGAAGAGAAAAGAAATGATGTGGTTTGGCAAGGCAAATGCTCCGGTACAGTTTACATTGGAGGAAGTGAATCAGAAGGACATTTTTCTTTGATAAATGAGGCGTATTCCATGTTTGCACATACGAACCCATTGCATATGGATGTATTCCAAAGTGTAGTTCGATTTGAGGTGGAAGTTGTGGCCATGACGGCTGCATTACTTGGCAGTAAAGAAAAGGCTTCTGGGGGACAGATTTGTGGAAACATGACTTCTGGAGGAACTGAAAGTATATTATTAGCTGTGAAAACATCACGTGACTATATGAAAGCAAAGAGGGGAATCACAAGGCCAGAAATGATAATACCTGAATCTGCACACTCGGCATATGACAAGGCGGCACAATATTTTAACATCAAACTTTTGCGTGTTCCTGTAAATAAAGAATTTCAAGCAGATGTCAAAGGGATTAGACGGCATATTAACAAAAACACCATTTTGATAGTTGGCTCTGCACCTGGGTTCCCACATGGCATCATCGACCCTATTGAGGAGCTTGGTGAATTGGCTTCTAGTTTTGGAATTTGTTTTCATGTTGATCTTTGTCTTGGAGGCTTTGTATTGCCTTTCGCTCGTAAACTTGGGTACCCAATTCCACCTTTCGATTTTTCTGTGGAAGGAGTGACCTCAATATCAGTCGATGTGCACAAATATGGGCTGGCTCCCAAAGGAACAAGTGTAGTTTTATATAGAAATCATGACATCAGAAAGCATCAATTTGTTGCTGTTACTGAATGGTCGGGTGGGCTTTACGTTTCTCCAACCATAGCTGGAAGCAGGCCTGGTGCTTTGATTGCTGGGGCTTGGGCAGCAATGATTTCTTTAGGACAAGAAGGATATTTGAATAACACAAGAGAGACCATGGAAGTATCAAAAAAATTACAGAGAGGAATAAAGGATATTCCCGAGTTATTTGTCATTGGAAGGCCAGACATGACAATTGTGGCATTTGGATCTAATGTCGTAGACATATTCGAAGTCAATGACATATTGTCATCCAAAGGCTGGCATTTGAATGCATTGCAGAGACCCAACAGCATTCACATCTGTCTGACCCTTCAACATGTTACCATCCTTGAGGACTTCCTCAAGGATCTGAAGGAATCTGTCCAAACTGTAAAACAAAACCCAGGTCCAATCAATGGAGGACTTGCTCCGATATATGGTGCAGCAGGGAAGATGCCCGACAGGGGAATGGTTGGGGAGTTGCTGGTAAATTTCATGGACAGTACATGCTAG 1281 0.4208 MKEEKRNDVVWQGKCSGTVYIGGSESEGHFSLINEAYSMFAHTNPLHMDVFQSVVRFEVEVVAMTAALLGSKEKASGGQICGNMTSGGTESILLAVKTSRDYMKAKRGITRPEMIIPESAHSAYDKAAQYFNIKLLRVPVNKEFQADVKGIRRHINKNTILIVGSAPGFPHGIIDPIEELGELASSFGICFHVDLCLGGFVLPFARKLGYPIPPFDFSVEGVTSISVDVHKYGLAPKGTSVVLYRNHDIRKHQFVAVTEWSGGLYVSPTIAGSRPGALIAGAWAAMISLGQEGYLNNTRETMEVSKKLQRGIKDIPELFVIGRPDMTIVAFGSNVVDIFEVNDILSSKGWHLNALQRPNSIHICLTLQHVTILEDFLKDLKESVQTVKQNPGPINGGLAPIYGAAGKMPDRGMVGELLVNFMDSTC* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1492 426 PANTHER - 3 426 - -
Vvi1g1492 426 FunFam sphingosine-1-phosphate lyase 1 26 290 - -
Vvi1g1492 426 Pfam Pyridoxal-dependent decarboxylase conserved domain 31 331 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vvi1g1492 426 FunFam Sphingosine-1-phosphate lyase 1 386 425 - -
Vvi1g1492 426 FunFam Sphingosine-1-phosphate lyase 1 278 389 - -
Vvi1g1492 426 Gene3D - 23 290 IPR015421 GO:0003824
Vvi1g1492 426 SUPERFAMILY PLP-dependent transferases 10 390 IPR015424 -
Vvi1g1492 426 Gene3D - 390 424 - -
Vvi1g1492 426 Gene3D Aspartate Aminotransferase, domain 1 6 389 IPR015422 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1492 42 384 Calmodulin-binding Proteins AT5G17330 25.895 1.03e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1492 K01634 - vvi:100259208 857.825