Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1486 ATGAGCGTGACTGACCTTGTGCAACTAGAGAGAGAACTTGATGCTGCCCTGCTTCAAACCAAATCTAGAAAGAATCAACTAATGATGGAGTCCATAAGGCATCTCCATGAAAAGGAAAGGATGCTGAGGCAAGAAAAGGAGCTTCTAGAGAAAGAGATGGAAGCAATGAGGAAGGAGAAGGAAGAAGGCTGGAAGGAGTGTGCGATTGGGAACAACCTCGATCCCTTTAACCCGGAAGAGCCCTGTCCTCATCAAAGGACAACCCTTTCCTTGCTTAGAGGGTAG 285 0.4702 MSVTDLVQLERELDAALLQTKSRKNQLMMESIRHLHEKERMLRQEKELLEKEMEAMRKEKEEGWKECAIGNNLDPFNPEEPCPHQRTTLSLLRG* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1486 94 Coils Coil 32 62 - -
Vvi1g1486 94 MobiDBLite consensus disorder prediction 71 94 - -
Vvi1g1486 94 Coils Coil 6 26 - -
Vvi1g1486 94 Pfam K-box region 1 53 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vvi1g1486 94 ProSiteProfiles K-box domain profile. 1 59 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1486 1 53 MADS-box Gene Family AT1G26310 47.170 1.46e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1486 K09264 - vvi:100267653 153.68