Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1452 ATGAAGTCCTTCATATCAGCCATCCTCTCTCTCTCACCCCTTTGTTTTGCAGCCACACACCAAGCCTCATGGCCTCTTCTTCTCCTTCTCTTCTCTGTCTCCTCTCTCATCTTCACTCTCTTCCTCAACTTCTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACCACCATGGAAAGTACTCTTCAAAGCTCTCTGGTCCCATTGGCTGGCCCTTGTTGGGGTCCTTACCTCTAATGGGTTCGCTCGCTCATCGAAAACTGGCCACCATGGCTGCTTCCTGTGGTGCAACTCGGCTCATGGCATTGAGCCTTGGTGTAACTCCAGTTATCATCAGTAGTCACCCGGACACGGCCAAAGAAATCCTATGTGGGTCTTCTTTCTCCAACCGTCCAGTGAAGGCATCAGCTCGTCTACTGATGTTCGAGCGCGCCATTGGCTTCGCTCCCTCCGGGGACTACTGGCGCCATCTTAGGCGCATCGCCGCAAACTACATGTTCTCTCCCAAGAGAATTTCTGGGTCTGAGGCTGTCCGCCTCCGTGTGGCTGATGAGATGGTAGTAGGAGTGCGGAAGGAGATGGAGGAGAGAAGTGTTGTGAAATTAAGAGGGATTTTACAGAAGGGCTCTCTGAGTAACATCATGGAGAGTGTGTTTGGTAGGGGTTTAGGAAGTGTAGAAGGAGAGGGATTAGGGTTTATGGTGATAGAAGGATATGAATTGATTGCAAAATTCAATTGGGAAGATTACTTTCCACTAGGGTTTATAGACTTTTACGGGGTAAAGAGAAGGTGTAGTAAATTGGCAGCTAAGGTGAATGGTGTGGTGGGGAAGATGATAGAAGAAAGAAAAAGAGTTGGAGAGTTGAGTGGTGGTGGAAATGATTTTCTCAGTGTTTTGCTGTCTTTGCCAAAAGAGGATCAGCTGAGTGATTCAGATATGGTTGCTGTCTTGTGGGAGATGATATTTAGAGGCACAGACACAGTGGCCATTCTTCTTGAATGGATCATGGCCAGAATGGTTATACACCAAGACATCCAAGCAAAAGCCCAGGAAGAGCTTGACACGTGCCTTGGCAACCAGTCGCACGTGCAAGACTCTCACATTCAAAGCCTCCCTTATCTCCAAGCCATTGTGAAAGAGGCCCTCCGAATGCACCCTCCAGGCCCATTACTCTCATGGGCCCGGCTCGCGATCCATGATGTCCACGTAGGCAAGTTCTTTGTGCCAGCTGGCACAACTGCAATGGTCAATATGTGGGCCATAGCCCATGACCCGACAATTTGGAAAGATCCATGGGCCTTTAAACCAGATCGGTTCATTAACGAGGATGTGTCGATCATGGGTTCGGATCTAAGGCTGGCACCATTCGGGTCAGGTCGTCGGGCATGCCCGGGAAAGGCACTCGGTTTAGCCACGGTTCACTTATGGCTCGCTCGACTTCTCCATCAGTTCAAATGGCTCCCAACCCATCCCGTGGATCTTGGAGAATGCTTGAGGCTCTCCCTTGAAATGAAGAAACCTCTCATTTGTTGTGCAATTCCTCGAGTGTGA 1551 0.4971 MKSFISAILSLSPLCFAATHQASWPLLLLLFSVSSLIFTLFLNFWLVPGGFAWRNHHGKYSSKLSGPIGWPLLGSLPLMGSLAHRKLATMAASCGATRLMALSLGVTPVIISSHPDTAKEILCGSSFSNRPVKASARLLMFERAIGFAPSGDYWRHLRRIAANYMFSPKRISGSEAVRLRVADEMVVGVRKEMEERSVVKLRGILQKGSLSNIMESVFGRGLGSVEGEGLGFMVIEGYELIAKFNWEDYFPLGFIDFYGVKRRCSKLAAKVNGVVGKMIEERKRVGELSGGGNDFLSVLLSLPKEDQLSDSDMVAVLWEMIFRGTDTVAILLEWIMARMVIHQDIQAKAQEELDTCLGNQSHVQDSHIQSLPYLQAIVKEALRMHPPGPLLSWARLAIHDVHVGKFFVPAGTTAMVNMWAIAHDPTIWKDPWAFKPDRFINEDVSIMGSDLRLAPFGSGRRACPGKALGLATVHLWLARLLHQFKWLPTHPVDLGECLRLSLEMKKPLICCAIPRV* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1452 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 SUPERFAMILY Cytochrome P450 66 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vvi1g1452 516 FunFam Cytochrome P450 78A5 56 515 - -
Vvi1g1452 516 Pfam Cytochrome P450 66 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 Gene3D Cytochrome P450 52 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PANTHER CYTOCHROME P450 78A7-RELATED 15 515 - -
Vvi1g1452 516 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1452 516 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1452 Vvi-Chr1 20910125 20913461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1452 18 515 Cytochrome P450 AT1G74110 51.233 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1452 - - vvi:100257370 1020.38