Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g1443 | ATGAATGTGCCTGTTGACGAAGGACTGTTCATTTCAATGCTTTTAAAGCTCATGAATGTCAAGAAGACAATTGAACTCGGAGTTTTCACCGGTTATTCTCTCTTGGCAACCCCTCTTGCCCTGCCTCAAGATGGCAAGGCAAGGCTCTCTAGAAAAGAAAATAAAGCGTACCAAATTGGAGTGCCATTTATCAAGAAGCCAGGTGTGGAGCATAAGATCAACTTCATCCAATCGGATGCAATGTCAGTTCTAAATGATCTCATTGCCGATGGGAACGAAGAAGGGACATTGGATTTTGCGTTTGTGGATGCTGATAAGGAGAACTACCTCAACTACCATGAGCTGCTGCTGAAGTTGGTTAGAGTTGGAGGCATAATCGCTTACGATAACACTCTATGGTTTGGTTCAGTAGCGCGATCTGAAGAAGAAGAAATGATGGATTTTGAGAGAGCAGGCAGAGTCCATCTCATGAAGTTGAACAAATTCTTGGCATCAGATCCCAGGGTTGAACTCTCTCACCTTTCCATTGGAGATGGCATCGCGCTCTGCAGGCGCCTCTATTAG | 564 | 0.4468 | MNVPVDEGLFISMLLKLMNVKKTIELGVFTGYSLLATPLALPQDGKARLSRKENKAYQIGVPFIKKPGVEHKINFIQSDAMSVLNDLIADGNEEGTLDFAFVDADKENYLNYHELLLKLVRVGGIIAYDNTLWFGSVARSEEEEMMDFERAGRVHLMKLNKFLASDPRVELSHLSIGDGIALCRRLY* | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g1443 | 187 | Gene3D | Vaccinia Virus protein VP39 | 1 | 187 | IPR029063 | - | |
Vvi1g1443 | 187 | ProSitePatterns | EF-hand calcium-binding domain. | 103 | 115 | IPR018247 | - | |
Vvi1g1443 | 187 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 3 | 185 | IPR029063 | - | |
Vvi1g1443 | 187 | PANTHER | O-METHYLTRANSFERASE-RELATED | 1 | 186 | - | - | |
Vvi1g1443 | 187 | Pfam | O-methyltransferase | 1 | 186 | IPR002935 | GO:0008171 | |
Vvi1g1443 | 187 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 1 | 186 | IPR002935 | GO:0008171 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi1g1443 | Vvi-Chr1 | 20819229 | 20820001 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi1g1443 | 1 | 186 | Monolignol Biosynthesis Gene Families | AT1G24735 | 59.140 | 3.34e-73 | 217 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g1443 | K00588 | K13272 | vvi:100250579 | 352.443 |