Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1443 ATGAATGTGCCTGTTGACGAAGGACTGTTCATTTCAATGCTTTTAAAGCTCATGAATGTCAAGAAGACAATTGAACTCGGAGTTTTCACCGGTTATTCTCTCTTGGCAACCCCTCTTGCCCTGCCTCAAGATGGCAAGGCAAGGCTCTCTAGAAAAGAAAATAAAGCGTACCAAATTGGAGTGCCATTTATCAAGAAGCCAGGTGTGGAGCATAAGATCAACTTCATCCAATCGGATGCAATGTCAGTTCTAAATGATCTCATTGCCGATGGGAACGAAGAAGGGACATTGGATTTTGCGTTTGTGGATGCTGATAAGGAGAACTACCTCAACTACCATGAGCTGCTGCTGAAGTTGGTTAGAGTTGGAGGCATAATCGCTTACGATAACACTCTATGGTTTGGTTCAGTAGCGCGATCTGAAGAAGAAGAAATGATGGATTTTGAGAGAGCAGGCAGAGTCCATCTCATGAAGTTGAACAAATTCTTGGCATCAGATCCCAGGGTTGAACTCTCTCACCTTTCCATTGGAGATGGCATCGCGCTCTGCAGGCGCCTCTATTAG 564 0.4468 MNVPVDEGLFISMLLKLMNVKKTIELGVFTGYSLLATPLALPQDGKARLSRKENKAYQIGVPFIKKPGVEHKINFIQSDAMSVLNDLIADGNEEGTLDFAFVDADKENYLNYHELLLKLVRVGGIIAYDNTLWFGSVARSEEEEMMDFERAGRVHLMKLNKFLASDPRVELSHLSIGDGIALCRRLY* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1443 187 Gene3D Vaccinia Virus protein VP39 1 187 IPR029063 -
Vvi1g1443 187 ProSitePatterns EF-hand calcium-binding domain. 103 115 IPR018247 -
Vvi1g1443 187 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 185 IPR029063 -
Vvi1g1443 187 PANTHER O-METHYLTRANSFERASE-RELATED 1 186 - -
Vvi1g1443 187 Pfam O-methyltransferase 1 186 IPR002935 GO:0008171
Vvi1g1443 187 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 186 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1443 Vvi-Chr1 20819229 20820001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1443 1 186 Monolignol Biosynthesis Gene Families AT1G24735 59.140 3.34e-73 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1443 K00588 K13272 vvi:100250579 352.443