Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1317 ATGGAAATCATGAAACCGGAGATAATATCCAGACAAACCATCAAACCCTCCTCTCCCACCCCAGATTCCAAAAAAAATTACAAGTTCTCCGTATTAGATCAACTCACTCCTGATCGCCTTTATGGGGGTGTCATCCTCTTCTACCAGAACAAGGAAGGGGATAACTCAGTTGATGTCGCCCATATATCAAGTGTGCTCAAGAAATCCCTATCTGAAACCCTAACACATTACTATCCACTAGCTGGAAGGATCAAAGATGGAGTTACGGTTGAGTGCAACGATGAGGGAGCCTATTTTTCCGAAGCCCGAGTTGACTGCCACCTGGAAGGATTTCTAAAACATCCGGAGGCTCGGGATGATGTAGACCTGATTGTGCCAGGGGAAATCCAATCGAACAGCTCGGACATGGGCAATTATTCAGATCACCTTTTTCAGCTGTGGAGGAATTGCGATTGGGCTGCGTTGGGTACGCAAGGTGCACTCAAGGCCATGGCGACTCAGTCTGGAGTGGAAAATCCCACGCGGGTCGAAGTTGTGGCTGCACTTATTTACAGATGTGCGGTTGATGCATCTAAAGTGAGCTCAGGTTCTCTAAAACCATCTGTTCTACGCCAAATTATGAACTTGAGGAAAAAGATTGTCCCACCATTGCCAGAGAAGTCTTTTGGGAACATACTTTGGACTTATGGGATACACACTACACCGAGGCATGAGTTCCATGCCTCGGTGGGTCAGTTGAAGGCAGGGCTGGCACATTTCTGTGATACCTATGGGAAAAATTTCACAGGACAAGAACTGATACGACTCATGTTCAAGGAAGAGGCTAAATCAGCCCATTCCAACGATAATCACCATGTCAATATGTATAGATGCACTAGTTGGTGTAGGTCTTCATTATACCAAACCGACTTTGGATGGGGAAAACCCATATGGCTAAGTCCTACAGGCGTTGGTTCAAAGAATATAATCTGTTTGACTGATACCAGGGAAGGGGATGGAATTGAAGCATTTGTTACTCTTGAAGAACAAGAAATGGCTGTATTTGAACGTGATGAGGAGCTCCTTCCATTCTCCTCTTTGAATTAA 1086 0.4521 MEIMKPEIISRQTIKPSSPTPDSKKNYKFSVLDQLTPDRLYGGVILFYQNKEGDNSVDVAHISSVLKKSLSETLTHYYPLAGRIKDGVTVECNDEGAYFSEARVDCHLEGFLKHPEARDDVDLIVPGEIQSNSSDMGNYSDHLFQLWRNCDWAALGTQGALKAMATQSGVENPTRVEVVAALIYRCAVDASKVSSGSLKPSVLRQIMNLRKKIVPPLPEKSFGNILWTYGIHTTPRHEFHASVGQLKAGLAHFCDTYGKNFTGQELIRLMFKEEAKSAHSNDNHHVNMYRCTSWCRSSLYQTDFGWGKPIWLSPTGVGSKNIICLTDTREGDGIEAFVTLEEQEMAVFERDEELLPFSSLN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1317 361 PANTHER F21J9.9 160 357 - -
Vvi1g1317 361 Pfam Transferase family 161 354 - -
Vvi1g1317 361 Pfam Transferase family 7 125 - -
Vvi1g1317 361 Gene3D - 3 160 IPR023213 -
Vvi1g1317 361 Gene3D - 161 355 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1317 Vvi-Chr1 19339944 19341220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1317 160 350 Monolignol Biosynthesis Gene Families AT5G48930 24.155 1.55e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1317 - - vvi:109123458 410.223