Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1315 ATGGAAGAGATCGAGGTTGAAGTGATCTCCACAGATACCATAAAACCATCTTCTCCGACCCCTGCCCACCTTCGCCATTTCCAACTCTCCTTTCTTGATCAAGTACTCAGTCCAATCTTTATACCCATCATCCTTTTCTATCCAATGGATGGCGATGTCAAAGTTGATACAATTGAAAGATCCATCTGGCTAAAGAAAACCTTATCCATGACCTTAGTTCAATTCTACCCACTAGCCGGACGAGTCAAGGACAATCTTTTCATCGACTGCACTGACCAGGGTGTTCCCTACTTTGAAGCCCAAGTTAAGTGCCAACTTTCGGAGTTCATATGCAACCCGGACCCCATGCAACTAAGCAAATTCGTTCCTCATGCACTGGACGATATAGTCGACATCGTCCTGGCAATCCAAGTCAATATCTTCAAGTGCGGTGGGATAGCAATTGGTGTTTGCATTTCCCACAAGGTCGCGGATGCTTCGTCAGTGGTTACGTTTGTCAACGGTTGGGCGGCTGTGGCTCGCCGGGATACTCATATGGTCTGTCCACAATTTGGACTGGCCAACCTCTTCCCTCCCATAAATTTATCCGGGTTCAATCCAAGCACTGGTATGACAAAGGAGAAGATTCTGACAAAGAGATTTGTATTTAGTGCCTCTAGTGTAGCTGCACTTAGAGAGAAGTACGCTGATCAAAGCACAACCGAAGATCTCCCAAGGCGTCCTACACGTATCGAAGCCTTATCGGCTCTCATATGGAGCCGCTTTGTGGCTGTCACTCATGGGATGGCAGACCCAAAAAAAATCTACACGATCCTGCATGCGGTGAACCTACGTACAAGGATGGACCCTCCATTGCCGGAGAATTCCTTTGGGAATATTATCTGGTTTGCGATAACAAGACCATGCATCGACGGTATGAAAGAAGGGAAGCGCCATGCCCTTGTGAACCAAATGAGAGAAGCAATAGAAAAAATCGATGGAGATTACATAAAAAAACTTCCAGAGGGCATAAAGCACTTGAATTTCTTGAAAGAGCGAGCTGAAAGAGTCACCAAAGGAGAGATAGAGTCATTTCGCTTTACCAGCTTTTGTAGGTTCCCTGTATATGAAGCTGATTTTGGATGGGGGAAGCCTAAATGGGTTGGATCAGGTAGCCTACCTTTCAAGAATCTAGTTATTTTCATCGACAGTAGTGGAACTAATGGTGGAATAGAAGCATGGATTAACTTGGTGGAGGAAGACATGGATAAATTCCAAGGAGACGAGGAGTTACTCTCATTTGTTTCTCCAACTTAA 1296 0.4522 MEEIEVEVISTDTIKPSSPTPAHLRHFQLSFLDQVLSPIFIPIILFYPMDGDVKVDTIERSIWLKKTLSMTLVQFYPLAGRVKDNLFIDCTDQGVPYFEAQVKCQLSEFICNPDPMQLSKFVPHALDDIVDIVLAIQVNIFKCGGIAIGVCISHKVADASSVVTFVNGWAAVARRDTHMVCPQFGLANLFPPINLSGFNPSTGMTKEKILTKRFVFSASSVAALREKYADQSTTEDLPRRPTRIEALSALIWSRFVAVTHGMADPKKIYTILHAVNLRTRMDPPLPENSFGNIIWFAITRPCIDGMKEGKRHALVNQMREAIEKIDGDYIKKLPEGIKHLNFLKERAERVTKGEIESFRFTSFCRFPVYEADFGWGKPKWVGSGSLPFKNLVIFIDSSGTNGGIEAWINLVEEDMDKFQGDEELLSFVSPT* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1315 431 Gene3D - 206 426 IPR023213 -
Vvi1g1315 431 Gene3D - 3 196 IPR023213 -
Vvi1g1315 431 PANTHER F21J9.9 7 429 - -
Vvi1g1315 431 Pfam Transferase family 5 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1315 Vvi-Chr1 19296065 19297360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1315 4 419 Monolignol Biosynthesis Gene Families AT5G48930 24.887 3.53e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1315 K13065 - vvi:100254574 875.159