Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1313 ATGATTAATTTATGTGATTATATAAATATTCTACATATCGAGGTTGAAGAAGGTGGTGTTGAAAGGTGTCGCCGGCTAAAAGAGTCCTTATCAGAGATCTTGGTCCGGTTTTATCCACTGGCTGGAAGGGTGAGGGATGATGCTTTGGTGGAGTGCAATGATGAGGGTGTTCCCTACTCTAAAGCCAAAGTTAATTGCCAACTTGCTGCTATTTCCCCAAGACGACCTACGCGGATTGAGGTTTTATCGGCTTTCATATGGAGTCATTTTGTGGCTGCCACGCATGGGAAGACAGACCCAGAAAGAATCTACACTATGTTGCATTCAGTGAACTTAAGGACAAGGATGGACCCTCCATTGCCAGAGAACTATTTTGGGAATGTTAGTCGACTTGCAATAGCAACACCGTGCATGGATAGTGAAAAAGAGTGTCACGACTTTGTGAACCATATGAGAGATGCAATAAGTAAAATCAATGGAGACTATGTGAGAAAACTTCAAGAAGGATATGGGTACTTAAATTTCATGAAGAAGCGCACTGAAAGTGTCAGCAAAGGAGAGGTAGTCTCATTTACCTTTACCAGTTTGTGTAGGTTTCCTCTATATGAAGGTGATTTTGGGTGGGGAAAGCCCGTATGGGTGGGCTCTGCTAGCCTACTGTTCAAGAATCTAGTTGTCTACATGGACAATGGAATAGGCAGGGAAATAGAGACATGGGTTAACTTGAAGGAGGTAGACATGGCTAAATTTCAAGAAGACAAGGAGTTCCTCTCATTTGTTTCTAGGATCTTGGATGCCAAACTATGA 807 0.425 MINLCDYINILHIEVEEGGVERCRRLKESLSEILVRFYPLAGRVRDDALVECNDEGVPYSKAKVNCQLAAISPRRPTRIEVLSAFIWSHFVAATHGKTDPERIYTMLHSVNLRTRMDPPLPENYFGNVSRLAIATPCMDSEKECHDFVNHMRDAISKINGDYVRKLQEGYGYLNFMKKRTESVSKGEVVSFTFTSLCRFPLYEGDFGWGKPVWVGSASLLFKNLVVYMDNGIGREIETWVNLKEVDMAKFQEDKEFLSFVSRILDAKL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1313 268 Pfam Transferase family 75 256 - -
Vvi1g1313 268 Pfam Transferase family 24 69 - -
Vvi1g1313 268 Gene3D - 54 259 IPR023213 -
Vvi1g1313 268 PANTHER F21J9.9 21 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1313 Vvi-Chr1 19281786 19282972 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1313 80 224 Monolignol Biosynthesis Gene Families AT5G48930 27.044 2.60e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1313 K13065 - tcc:18609668 290.041