Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1308 ATGCCTACTGTAGCAGTGAAGCTGTACAGCTTCCTTTTCAAATTCACCGTCAAGCATCGACTCCAGAGCCGAATCGGGGCTTCTCCCGATGAGGCTGATCCCTCCGGCGTCACTTCTCGCCCGGAGGATGGTGTCGCCCCCGCCAACCCCACCTTCTCCGATGGCGTCGCCACCAAGGACATCCACGTGGACGATCCTCGCGCCTCCCTCTCTCTCCGCCTTTTCCTCCCCGAGACGGCGCTATCCGGCTCCGATTCTAAATCTAGGGTTAGGGTAAATAGGGATGACAGCTACGGCGGGTATTCGCCGTCGGCTGGTAGGAGTGGGCGAAGGTTGCCGGTGTTGTTGCAGTTTCATGGAGGAGGATTTGTGAGTGGGAGTAACAATTCGGTGGCGAATGATGTGTTCTGTAGGAGGATTGCGAAGCTGTGCGATGTGGTGGTGGTGGCAGTGGGGTATCGGCTGGCGCCGGAGAATCGGTACCCGGCTGCGTTTGAGGATGGGGTGAGGGCGTTGCATTGGGTGGGGAAGCAGGCGAATTTGGCGGATTGGAGCAGATCGCAGTGGAAGGTGGGTAGGGATACTATGAATGATAACTTTGGAGCTTCCATGGTTGAGCCTTGGTTGGCGGCTCATGGCGATCCTTCCAGGTGTGTTCTCCTTGGGGTGAGCTGTGGTGCAAATATTGCAGACTATGTGGCTCGGAGGTCTGTAGAGGCAGGCAAGCTTTTAGACCCTGTTAAGGTGGTGGCCCAAATTCTGATGTACCCTTTTTTCATTGGAAGTATCCCCACAAAATCAGAGATTAAACTGGCTAACTCTTACTTCTATGACAAAGCTATGTGCTTGCTTGCATGGAAACTCTTCCTACCTGAGGAAGAAGTGAACCTAGACCACCCAGCTGCCAACCCTCTGATTCCTGGGAGGGGACCACCCTTGAAGTGCATGCCTCCAACACTGACAGTTGTGGCAGAGCATGACTGGATGCGAGACCGAGCCATTGCTTATTCAGAGGAGCTCCGGAAAGTTAATGTGGATGCGCCCCTTCTTGATTACAAGGATGCTGTGCATGAGTTTGCTACCCTTGATGTGCTCCTCAAGACACCACAGGCCCAAGCCTGTGCTGAGGACATTGCCATATGGGTCAAGAAGTATATTTCACTCAGAGGCCATGAGTTTTCTTATTGA 1188 0.537 MPTVAVKLYSFLFKFTVKHRLQSRIGASPDEADPSGVTSRPEDGVAPANPTFSDGVATKDIHVDDPRASLSLRLFLPETALSGSDSKSRVRVNRDDSYGGYSPSAGRSGRRLPVLLQFHGGGFVSGSNNSVANDVFCRRIAKLCDVVVVAVGYRLAPENRYPAAFEDGVRALHWVGKQANLADWSRSQWKVGRDTMNDNFGASMVEPWLAAHGDPSRCVLLGVSCGANIADYVARRSVEAGKLLDPVKVVAQILMYPFFIGSIPTKSEIKLANSYFYDKAMCLLAWKLFLPEEEVNLDHPAANPLIPGRGPPLKCMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPLLDYKDAVHEFATLDVLLKTPQAQACAEDIAIWVKKYISLRGHEFSY* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1308 395 MobiDBLite consensus disorder prediction 86 107 - -
Vvi1g1308 395 MobiDBLite consensus disorder prediction 26 58 - -
Vvi1g1308 395 PANTHER ARYLACETAMIDE DEACETYLASE 52 360 - -
Vvi1g1308 395 Pfam alpha/beta hydrolase fold 115 360 IPR013094 GO:0016787
Vvi1g1308 395 SUPERFAMILY alpha/beta-Hydrolases 46 386 IPR029058 -
Vvi1g1308 395 Gene3D alpha/beta hydrolase 23 390 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1308 Vvi-Chr1 19227005 19229788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1308 1 395 Carbohydrate Esterase AT3G27320 68.765 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1308 - - vvi:100251099 796.578