Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1293 ATGACTATTCCACCAGATGCAAATCATTTTCTACAACATGGGTTTTGGTTTATGGGAGGATTAAGGGGATTTGCACCAATGGAAATTGAAAGATTTGGGAACTTCACGTTGTCTGCAGCTTTTGGTGGGTTTTTCCCATCGCTTTCTAACCTTCAAGTGCATGGATTCCCTGATGCTACCATGTGTGGGCCAGATGCTGGTTTCCCATATGGATTTTCTAATTTATTTCATGGTAGATATGCTCATGGATTCCCTCAGCATCCACCAACTCAAGGGCAACAAGCAGATTACCATATGAAGATGTTATTCTTGATGATTGAGTGCAAACTACTGACAGATGTTTAG 345 0.4116 MTIPPDANHFLQHGFWFMGGLRGFAPMEIERFGNFTLSAAFGGFFPSLSNLQVHGFPDATMCGPDAGFPYGFSNLFHGRYAHGFPQHPPTQGQQADYHMKMLFLMIECKLLTDV* 115
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1293 Vvi-Chr1 19075968 19076365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1293 4 100 C3H Transcription Factor Family AT1G19310 52.941 3.97e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1293 K10666 - vvi:100259073 192.971