Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1283 ATGGGCTCAACAGCATGTATTTTTGTTGCTCTATTGTTTATTTTCTCAAATATGCCATGTGAAGCTCAGCTATCTTCCTCATTCTACGATAACACCTGTCCAAAAGCCCTCAGTACCATCCGGACAGCGGTCAGGACTGCTGTATCTCGTGAGCGTAGAATGGCAGCATCTCTAATTCGTCTCCACTTCCATGATTGCTTCGTCCAGGGCTGCGATGCATCAATCTTGCTTAATGATTCCTCCTCCATTCAAAGCGAGAAAAATGCTCCCAATAATTTGAATTCAGTTCGAGGATACGATGTCATAGATGATGTCAAGTCTGAAGTGGAGAGCATTTGTCCCGGTATTGTATCGTGTGCTGACATTCTAGCAGTGGCAGCTCGGGATGCATCCGTCGCTGTGAGTGGGCCAACATGGACAGTGAATCTTGGAAGAAGAGATTCCACAACCTCAGGCCTAAGCCAAGCTGCCACCAACCTTCCTAACTTCAGTGACGGCCTCGACAGGCTTATTTCCTTGTTCGGTAGCAAAGGTTTGAGCGAAAGAGACATGGTTGCCCTTTCAGGTTCCCACACGATAGGCCAAGCAAGATGTGTGACATTCCGGGATAGGATATACGACAATGGAACTGATATTGACGCTGGCTTTGCTAGTACCAGGAGACGCCGCTGTCCTGCTACTAGTGGGGATGGTGATGACAATATTGCAGCCCTGGATTTGGTGACACCCAATTCTTTTGATAACAATTACTTCAAGAATCTCATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTACTTTTCAGCGGAGGTTCTACTGACAGTATCGTCACTGGGTATAGCAAGAGCCCTTCAACATTCAGCTCTGATTTTGCATCAGCCATGGTTAAGATGGGAAATATTGAACCTCTCACTGGCTCTGCCGGAGAGATACGAAAACTCTGTAGTGCTATAAATTGA 960 0.4615 MGSTACIFVALLFIFSNMPCEAQLSSSFYDNTCPKALSTIRTAVRTAVSRERRMAASLIRLHFHDCFVQGCDASILLNDSSSIQSEKNAPNNLNSVRGYDVIDDVKSEVESICPGIVSCADILAVAARDASVAVSGPTWTVNLGRRDSTTSGLSQAATNLPNFSDGLDRLISLFGSKGLSERDMVALSGSHTIGQARCVTFRDRIYDNGTDIDAGFASTRRRRCPATSGDGDDNIAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVTGYSKSPSTFSSDFASAMVKMGNIEPLTGSAGEIRKLCSAIN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1283 319 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 Gene3D - 28 319 - -
Vvi1g1283 319 ProSiteProfiles Plant heme peroxidase family profile. 23 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vvi1g1283 319 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 Gene3D Peroxidase, domain 2 161 298 - -
Vvi1g1283 319 FunFam Peroxidase 161 298 - -
Vvi1g1283 319 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Vvi1g1283 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1283 319 FunFam Peroxidase 27 168 - -
Vvi1g1283 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Vvi1g1283 319 PANTHER PEROXIDASE 72-RELATED 21 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1283 Vvi-Chr1 18657363 18658564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1283 7 319 Peroxidase AT1G14550 65.714 3.30e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1283 K00430 - vvi:100263220 622.854