Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1282 ATGGGCTCAATAGCAGGGAATTATGGTGCATGCATTTTTGTGGCAGTTTTATTGATTCTCTCGATCATGCCATGTGAAGCTCAGCTTTCTTCATCATTCTACGATAATACATGTCCAAAGGCACTCAGTACCATCCGAACAGCGACAAGGAAGGCGGTATCTCGTGAGCGTAGAATGGCGGCATCTCTAATTCGTCTCCATTTCCACGATTGCTTTGTTCAGGGATGTGATGCATCAATCTTGCTTGATGATTCCTCCTCCATTCAAAGTGAGAAAAATGCACCTAATAATTTGAATTCAGCTAGAGGATATGAAGTCATACACGATGTAAAGTCTCAAGTGGAGAGCATCTGTCCCGGCATTGTATCTTGTGCTGACATTCTTGCAGTGGCAGCCCGAGATGCATCTGTTGCTGTTGGAGGGCCAACATGGACAGTGAAGCTTGGAAGAAGAGACTCCACCACTTCAGGCCTCAGCCAAGTTTCCAGCAACCTTCCTAGCTTCAGAGATAGCCTTGACAGGCTTATCTCCTTGTTTGGTAGCAAAGGTTTGAGTACAAGAGACATGGTTGCCCTCTCAGGTTCTCATACAATAGGCCAAGCAAGATGTGTGACATTCCGGGATAGGATATACGACAATGGAACTGATATTGACGCGGGCTTTGCTAGTACCAGGAGACGCCGCTGTCCTGCTGATAATGGGGATGGTGATGACAATCTTGCAGCCCTCGATTTGGTGACACCCAACTCTTTTGATAACAATTACTTCAAGAATCTCATTCAAAAAAAGGGTCTTCTTCAATCAGACCAAGTACTTTTCAGCGGAGGATCCACAGACAGTATTGTCAGTGAATATAGCAAGAACCGTAAAACTTTCAGTTCTGATTTCGCATTAGCCATGGTAAAGATGGGAGATATTGAACCTCTCACTGGCGCGGCTGGAGAGATACGTGAATTCTGCAATGCCATAAACTAA 975 0.4503 MGSIAGNYGACIFVAVLLILSIMPCEAQLSSSFYDNTCPKALSTIRTATRKAVSRERRMAASLIRLHFHDCFVQGCDASILLDDSSSIQSEKNAPNNLNSARGYEVIHDVKSQVESICPGIVSCADILAVAARDASVAVGGPTWTVKLGRRDSTTSGLSQVSSNLPSFRDSLDRLISLFGSKGLSTRDMVALSGSHTIGQARCVTFRDRIYDNGTDIDAGFASTRRRRCPADNGDGDDNLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSKNRKTFSSDFALAMVKMGDIEPLTGAAGEIREFCNAIN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1282 324 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PANTHER PEROXIDASE 72-RELATED 25 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Vvi1g1282 324 Gene3D Peroxidase, domain 2 166 303 - -
Vvi1g1282 324 FunFam Peroxidase 32 175 - -
Vvi1g1282 324 ProSiteProfiles Plant heme peroxidase family profile. 28 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 Gene3D - 33 324 - -
Vvi1g1282 324 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Vvi1g1282 324 FunFam Peroxidase 166 303 - -
Vvi1g1282 324 SUPERFAMILY Heme-dependent peroxidases 28 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1282 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1282 Vvi-Chr1 18652712 18653949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1282 12 324 Peroxidase AT1G14550 66.032 3.56e-154 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1282 K00430 - vvi:100259700 617.846