Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1280 ATGGCAGCATCTCTGATTCGTCTCCATTTCCATGACTGCTTTGTTCAGGGCTGTGATGCATCAATCTTGCTTGATGATTCCCCCACCATTCAAAGTGAGAAAAATGCACCTAACAATAACAATTCAGTTAGAGGGTTCGAAGTCATAGACAATGTCAAGTCTCAGGTGGAGAACATTTGTCCAGGCGTTGTATCCTGTGCAGACATTCTTGCAGTGGCAGCACGAGATGCATCTGTTGCAGTTGGGGGGCCAACATGGACACTGAAGCTTGGAAGAAGAGACTCCACCACTTCAGGCCTCAGCCAAGCTGCAACTAACCTTCCAACCTTTAGAGACGGCCTGGACAGGCTTACTTCCTTGTTCAGTAGCAAAGGTTTAAGTACAAGAGACATGGTTGCTCTTTCAGGTTCCCATACAATAGGCCAAGCAAGATGTGTGACCTTCCGCGATAGAATATACGGCAATGGAACTAACATTGATGCTGGCTTTGCTAGCACTCGGAGGCGCCGGTGTCCTGCTGATAATGGGAATGGTGATGATAATCTTGCACCCCTGGATTTGGTGACACCCAATTCTTTCGATAACAATTACTTCAAGAATCTCATTCAAAGAAAAGGCCTCCTTCAATCAGACCAGGTACTTTTTAACGGAGGATCTACCGATAGTATTGTCACGGAGTATAGCAAGAGCCCTTCAACTTTCAGCTCTGATTTTTCATCTGCCATGGTAAAAATGGGAGATATCGAGCCTCTCATTGGCTCTGCTGGAGAGATAAGAAAATTCTGCAACGTTATAAACTAA 801 0.4532 MAASLIRLHFHDCFVQGCDASILLDDSPTIQSEKNAPNNNNSVRGFEVIDNVKSQVENICPGVVSCADILAVAARDASVAVGGPTWTLKLGRRDSTTSGLSQAATNLPTFRDGLDRLTSLFSSKGLSTRDMVALSGSHTIGQARCVTFRDRIYGNGTNIDAGFASTRRRRCPADNGNGDDNLAPLDLVTPNSFDNNYFKNLIQRKGLLQSDQVLFNGGSTDSIVTEYSKSPSTFSSDFSSAMVKMGDIEPLIGSAGEIRKFCNVIN* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1280 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Vvi1g1280 266 SUPERFAMILY Heme-dependent peroxidases 1 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PANTHER PEROXIDASE 72-RELATED 1 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 ProSiteProfiles Plant heme peroxidase family profile. 1 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 FunFam Peroxidase 108 245 - -
Vvi1g1280 266 CDD secretory_peroxidase 1 265 IPR033905 GO:0004601|GO:0042744
Vvi1g1280 266 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Plant peroxidase signature 240 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Plant peroxidase signature 200 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Plant peroxidase signature 184 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 Gene3D Peroxidase, domain 2 108 245 - -
Vvi1g1280 266 Pfam Peroxidase 1 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1280 266 Gene3D - 1 266 - -
Vvi1g1280 266 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1280 Vvi-Chr1 18639096 18640222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1280 1 266 Peroxidase AT1G14550 67.164 1.54e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1280 K00430 - vvi:100252708 522.702