Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1276 ATGGGTTTAACAGCAGGGAGTTCAAGTTGGCCCTCTTGCATTTCTCCTGCCTGCATTTTTCTTGCTGTGTTCCTCATTCTTTCAAACATGCCTTGTGAAGCTCACCTATCTCCAACATTCTATGATCATACCTGTCCAAGAGCACTCACCACCATCCAGACAGCTGTCAGAACAGCTGTGTCACGTGAGCGTAGAATGGCAGCATCTCTAATTCGTCTTCACTTCCACGATTGCTTTGTCCAGGGCTGTGATGCATCAATCTTGCTTGATGATTCCTCCTCCATTCAAAGCGAGAAGAATGCACCTAATAATTTGAATTCAGTTAGAGGGTACGAAGTCATAGATAATATCAAGTCAAAGGTGGAGAGCCTATGTCCAGGCGTTGTATCTTGTGCAGACATTGTTGCCGTCGCAGCCCGAGATGCATCTGTTGCTGTTAGTGGCCCAACATGGACAGTGAGGCTTGGAAGAAGAGACTCCACCACTTCTGGCCTCAGCCAAGCTGCAACCAATCTTCCGAGCTTTAGGGACAGCCTAGACAAGCTTGTTTCCTTGTTCGGCAGCAAAGGTTTGAGTGCAAGAGACATGGTGGCCCTTTCGGGTTCCCATACAATAGGCCAAGCAAGATGTGTGACATTCCGGGATAGGATATACGACAATGGAACTGACATTGATGCCGGCTTTGCCAGTACCAGGAGACGCCGCTGTCCTGCTAATAATGGGAATGGTGATGACAATCTTGCACCTCTTGAGTTGGTGACGCCCAATTCTTTTGATAACAATTACTTCAAGAATCTCATTCGAAGGAAAGGTCTTCTTCAATCCGACCAAGTACTTTTTAGTGGAGGATCCACAGACACTATTGTCAATGAATACAGCAAGAGCCCAAAAACTTTCAGGTCTGATTTTGCATCCGCCATGGTGAAGATGGGAGATATTGAAGCTTTGACTGGATCTGCCGGAGTGATACGAAAATTCTGCAACGTCATAAACTAA 996 0.4629 MGLTAGSSSWPSCISPACIFLAVFLILSNMPCEAHLSPTFYDHTCPRALTTIQTAVRTAVSRERRMAASLIRLHFHDCFVQGCDASILLDDSSSIQSEKNAPNNLNSVRGYEVIDNIKSKVESLCPGVVSCADIVAVAARDASVAVSGPTWTVRLGRRDSTTSGLSQAATNLPSFRDSLDKLVSLFGSKGLSARDMVALSGSHTIGQARCVTFRDRIYDNGTDIDAGFASTRRRRCPANNGNGDDNLAPLELVTPNSFDNNYFKNLIRRKGLLQSDQVLFSGGSTDTIVNEYSKSPKTFRSDFASAMVKMGDIEALTGSAGVIRKFCNVIN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1276 331 Pfam Peroxidase 53 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Vvi1g1276 331 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 FunFam Peroxidase 173 310 - -
Vvi1g1276 331 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 PANTHER PEROXIDASE 72-RELATED 33 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 Gene3D Peroxidase, domain 2 173 310 - -
Vvi1g1276 331 ProSiteProfiles Plant heme peroxidase family profile. 35 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1276 331 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Vvi1g1276 331 FunFam Peroxidase 39 181 - -
Vvi1g1276 331 CDD secretory_peroxidase 35 330 IPR033905 GO:0004601|GO:0042744
Vvi1g1276 331 Gene3D - 39 331 - -
Vvi1g1276 331 SUPERFAMILY Heme-dependent peroxidases 36 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1276 Vvi-Chr1 18605528 18606847 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1276 19 331 Peroxidase AT1G14550 63.175 3.55e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1276 K00430 - vvi:100254462 636.721