Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1217 ATGTTAGTGAAACAAACCCGAAATAGTATGGATGTGGAAGTGAATCTTAGACTAGGCTCTGTAATGGATTTCCTTCATGCTTTACTTGTAGTAGCAGTTGCAGGGCTTCTAGGGATGGTTTTATTATGTAAGGTATGGAGAATTCAGGTGAGAAAGGGAAGGTCAGCACCAAAACCATATGGGGCATGGCCATTTAGAGGCCACCTTCATGTATTATGCGACCAAACCCCAATTTTCCGAACCCTTGGAGGCATGGCTGATAAGTTTGGTCACGTGTTCATGATCCGACTTGGAGTGCACTGCATGCTAGTGGTGACTGACCATGAAGCTGTTAAAGAATGTTTCACTATCAACTACAAGGTCTTTACGTCTTGCCCAAGTTTTAGCTTTGGAAAGCTCTTGGGTTACAACTATGCGGCGTTTGGTTTTGTACCTTATGGACCTCTTTGGCGTGAGATATGCAAGCTTTTAAAGATGGAAATTCTTATCGCCCGACGTCTTGATGCTTTGAAGCATGTGTAG 522 0.4349 MLVKQTRNSMDVEVNLRLGSVMDFLHALLVVAVAGLLGMVLLCKVWRIQVRKGRSAPKPYGAWPFRGHLHVLCDQTPIFRTLGGMADKFGHVFMIRLGVHCMLVVTDHEAVKECFTINYKVFTSCPSFSFGKLLGYNYAAFGFVPYGPLWREICKLLKMEILIARRLDALKHV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1217 173 PANTHER CYTOCHROME P450 82C3-RELATED 37 173 - -
Vvi1g1217 173 Pfam Cytochrome P450 57 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1217 173 SUPERFAMILY Cytochrome P450 46 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g1217 173 Gene3D Cytochrome P450 49 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1217 Vvi-Chr1 17060054 17060575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1217 56 173 Cytochrome P450 AT4G31940 47.059 3.20e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1217 - K23136 vvi:104880658 348.591