Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1188 ATGCAGAGCTCCACGTTTCGTTTGGCATTTTTGGTAGTGTTGATCTCTGTGCTTCTCTCTCTCAGAGATCCTAGCAAGGGTGAACCACAAAACCATGCTATTCATGGCATTTCTCCCCCAAAACTTGATCATCAGCCTTCTCTGGAATACGATTTTTACCGCAATTCTTGCCCAAAAGCTGAGTCCATCGTCAGATCGAGCATGGCTCAAATTTTCGCTGCCCACAGCGACACCCCTCCAGCTCTTTTGCGCCTGTTGTTCCATGATTGCTTTATTCAGGGATGTGATGCTTCCATACTTCTGGATGATAGCAATGAGAGCACGAACCGATCAGCTGAAAAGCTGGCCATTCCTAATCAGACCTTGAAGGGTTTTGACAAAGTCGAAAAGATCAAGGAAGAGCTTGAAAAAGCTTGTCCTGGGGTTGTCTCTTGCGCTGATATTCTTGTGCTTGCCACCAGAGATGGCATTGTCCTGGCTGGTGGCCCATTCTATCCAGTTTTTACTGGAAGGAGAGACAGTAATCAATCCTACTTTCAAGAAGCCATGGATGATATTCCAAAGCCGGACGGTAATATTACTCAAACACTTGGTCTATTCACTCTTAGAGGATTCAATGAAAGAGAAACAGTGAGTTTATTAGGAGGTCATAGCATTGGCAAAATCAGCTGTGAATTCATACAAGGACGCCTCTTCAACTTCTCGGGGACAGGGCAGCCAGACCCAAGTATAGCTTCTGATTTCCTTGATGAAATGAGACGGAATTGCCAAGACAGTGGCAACAGCAGCAATGGCACGGCTTCTCCTCCCATGGTATCAAGAGCTATGAGTGAGTTAACCTTGGGGATGACATACTATCAAGGATTGTCATCTTCAGTCTCATCTGGTTCTGCTTTTGACACCCATTACTACCAGAGCTTGCTGCAAGGGAGAGGACTTCTTTTTTCTGATCAGCAATTGATGGCTGAAGAGAAGACAGAAAGATTGGTCAGAGCTTATGCTTCTGATGATGGGTCTACCTTTCAAATAGACTTCGCTCGCTCTATGATGAAGATGTCGACCCTCAGTGTCCTGACTGGATCTCAAGGTCAGGTCCGGCTCAACTGCTCAAAGATGGTCAGCTCCTAA 1128 0.4583 MQSSTFRLAFLVVLISVLLSLRDPSKGEPQNHAIHGISPPKLDHQPSLEYDFYRNSCPKAESIVRSSMAQIFAAHSDTPPALLRLLFHDCFIQGCDASILLDDSNESTNRSAEKLAIPNQTLKGFDKVEKIKEELEKACPGVVSCADILVLATRDGIVLAGGPFYPVFTGRRDSNQSYFQEAMDDIPKPDGNITQTLGLFTLRGFNERETVSLLGGHSIGKISCEFIQGRLFNFSGTGQPDPSIASDFLDEMRRNCQDSGNSSNGTASPPMVSRAMSELTLGMTYYQGLSSSVSSGSAFDTHYYQSLLQGRGLLFSDQQLMAEEKTERLVRAYASDDGSTFQIDFARSMMKMSTLSVLTGSQGQVRLNCSKMVSS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1188 375 CDD secretory_peroxidase 48 371 IPR033905 GO:0004601|GO:0042744
Vvi1g1188 375 FunFam Peroxidase 51 198 - -
Vvi1g1188 375 SUPERFAMILY Heme-dependent peroxidases 48 372 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Haem peroxidase superfamily signature 161 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Haem peroxidase superfamily signature 292 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Haem peroxidase superfamily signature 143 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 Gene3D - 52 371 - -
Vvi1g1188 375 PRINTS Plant peroxidase signature 347 360 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 306 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 290 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 208 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 Pfam Peroxidase 64 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 FunFam Peroxidase 187 353 - -
Vvi1g1188 375 Gene3D Peroxidase, domain 2 187 353 - -
Vvi1g1188 375 ProSitePatterns Peroxidases proximal heme-ligand signature. 209 219 IPR019793 -
Vvi1g1188 375 ProSiteProfiles Plant heme peroxidase family profile. 47 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1188 375 PANTHER PEROXIDASE 25-RELATED 17 361 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1188 Vvi-Chr1 16513246 16515107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1188 48 373 Peroxidase AT4G33870 48.521 1.61e-105 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1188 K00430 - vvi:100265025 722.235