Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1182 ATGGTGAGCAGTATGGGACATCGTTCGTGGAGGAAAAGAAAATTTCACAAGTATCCAAAATCTTGGATACCTCCTTCCATGGATATCTTTGAGCTTGCACTCCAATTTGGAATCTCTGCCATAGTCATAGCCTGCCCATGTGTTCTGGCTTTGCAACTCCTACTGCTGCTATGGGTTCTCTGCAACAGCCCATTTGGATTAAAGAGTTAA 210 0.4381 MVSSMGHRSWRKRKFHKYPKSWIPPSMDIFELALQFGISAIVIACPCVLALQLLLLLWVLCNSPFGLKS* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1182 69 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 14 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1182 Vvi-Chr1 16286269 16286567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1182 14 51 Primary Pumps ATPases AT1G63440 76.316 2.62e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1182 K17686 - bvg:104892288 68.5514