Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1132 ATGCATTTCTCTACGCCCAGCTGCTTCCTCTTGCCTATCCTCGCTCTGCTCTTGATTTCAGCCTCATCAGCTCAATATGAAGAGCATGAAGAAGAATTAACTGACCCTCTCACTTATCTGGAAAATCCATCGTTGAATGAGATGTTGCCTGGCCTGTCATTTTCTTATTATCGTCAGACTTGTCCAGATCTTGAAGCCATTATCAACAGAAAAGTCAAGGAATGGATAGACAAGGATTACACTCTTGCTGCCAGTCTCATCAGACTGCATTTCCATGATTGCGCAGTTAAGGGATGTGATGCTTCCATTCTTTTAGACCATCCTGGGAGCGAGAGATGGGCAGATGCCAGCAAGACATTGAGAGGGTTCCAAGTGATTGATGATATCAAAGCAGAAGTTGAGAGGAAGTGCCCCAAGACCGTGTCATGTGCAGACATTCTGACCGCTGCAGCCAGAGATGCCACCATTCTGAGTCCCGCACCCGGAGATGCCACTGGTCTGGATCTGGTTCGAGTCCCATTCTGGATGGTTCCTTACGGGCGGAAAGATGGGCGAGTATCTATTGACAAGGAAGCTCAAACCGTGCCCATGGGACGGGAAAACGTGACTGCTCTGCTTGAATTTTTCCAGTCCAAGGGACTGAATGTACTTGATTTGGTTGTCCTCTCAGGAGCGCACACCATCGGGAGGACCACATGTGGTGCAATGCAACACCGGCTGTATGACTTCCACGGCACAGGCGAACCCGATCCATCTATTTCCCCTAAATATTTGAAGTTCTTGAGAAGAAAGTGCAGATGGGCCTCAGAGTACGTAGACCTAGACGCTATAACCCCACGGACTTTTGATGTCATGTACTACAAAAATCTTCAGCACAACATGGGACTTTTAGCCACTGATCAAATGCTAGGCTCCGATTCAAGGACTTCAGATCTTGTAGCCACATTGGTTTCCAAACCCTCAATCTTCTACAGCCAATTTGCATTGTCAATGGAGAAGCTTGGAAATACTCAGGTCCTTACAGGTGAAGACGGCGAAATCCGAGTTAACTGCAATTTTGTCAATCCTTGA 1071 0.4725 MHFSTPSCFLLPILALLLISASSAQYEEHEEELTDPLTYLENPSLNEMLPGLSFSYYRQTCPDLEAIINRKVKEWIDKDYTLAASLIRLHFHDCAVKGCDASILLDHPGSERWADASKTLRGFQVIDDIKAEVERKCPKTVSCADILTAAARDATILSPAPGDATGLDLVRVPFWMVPYGRKDGRVSIDKEAQTVPMGRENVTALLEFFQSKGLNVLDLVVLSGAHTIGRTTCGAMQHRLYDFHGTGEPDPSISPKYLKFLRRKCRWASEYVDLDAITPRTFDVMYYKNLQHNMGLLATDQMLGSDSRTSDLVATLVSKPSIFYSQFALSMEKLGNTQVLTGEDGEIRVNCNFVNP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1132 356 FunFam Peroxidase 196 334 - -
Vvi1g1132 356 Pfam Peroxidase 70 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 ProSitePatterns Peroxidases active site signature. 83 94 IPR019794 GO:0004601
Vvi1g1132 356 FunFam Peroxidase 55 207 - -
Vvi1g1132 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 218 228 IPR019793 -
Vvi1g1132 356 PANTHER PEROXIDASE 25-RELATED 21 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Haem peroxidase superfamily signature 275 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Haem peroxidase superfamily signature 83 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Haem peroxidase superfamily signature 218 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 Gene3D Peroxidase, domain 2 196 334 - -
Vvi1g1132 356 PRINTS Plant peroxidase signature 121 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Plant peroxidase signature 85 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Plant peroxidase signature 329 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Plant peroxidase signature 217 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Plant peroxidase signature 273 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Plant peroxidase signature 289 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 PRINTS Plant peroxidase signature 61 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 ProSiteProfiles Plant heme peroxidase family profile. 51 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi1g1132 356 Gene3D - 55 355 - -
Vvi1g1132 356 CDD secretory_peroxidase 51 354 IPR033905 GO:0004601|GO:0042744
Vvi1g1132 356 SUPERFAMILY Heme-dependent peroxidases 51 356 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1132 Vvi-Chr1 14982723 14984188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1132 52 355 Peroxidase AT1G30870 55.375 4.91e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1132 K00430 - vvi:100249548 712.22