Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1122 ATGCACATCTCCTCAACCTTCATGCCCACCATCACGACTTCTCACTTCGGTGCTTTCCAGCAACACCCCTTAGTCCACCACAAGGCTTCTTCTCACTTCCAATCTAAGGCCTACATCGTCATCTTCGATGCGGGTAGTTCTGGAAGTCGTGTCCATGTTTTCTACTTCGACAATGATTTGAATCTTATCCACATTGGGAAAGATCTCAAGCTCTTCGTGCAGACAAAACTAGGTTTAAGCACGAATCGAATGGGAAACCTAGCTAGCTGCAGAACCTCTGTTTCCCCTTCTATATAA 297 0.4579 MHISSTFMPTITTSHFGAFQQHPLVHHKASSHFQSKAYIVIFDAGSSGSRVHVFYFDNDLNLIHIGKDLKLFVQTKLGLSTNRMGNLASCRTSVSPSI* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1122 98 Gene3D - 24 97 - -
Vvi1g1122 98 Pfam GDA1/CD39 (nucleoside phosphatase) family 34 81 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1122 Vvi-Chr1 14501763 14502059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1122 8 80 Calmodulin-binding Proteins AT3G04080 45.946 1.50e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1122 K14641 - vvi:100267968 115.546