Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1121 ATGGGTCACCATCTTGGATGGAAAGCAAGAAGGCGTTTTTCAATAGGGAATTTGGGAAGGAAATACTCTTGTACAATTGGAGTGGTTGATCTTGGAGGTGGTTCTGTTCAAATGGCATATGCCATCTTAGAAACAACTACTGAAAAGGCTCCAAAGATCTCAGATGGAGAGGACACATATGCTAAGGAAATGTACCTCAAATGA 204 0.4118 MGHHLGWKARRRFSIGNLGRKYSCTIGVVDLGGGSVQMAYAILETTTEKAPKISDGEDTYAKEMYLK* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1121 67 Gene3D Exopolyphosphatase. Domain 2 5 67 - -
Vvi1g1121 67 Pfam GDA1/CD39 (nucleoside phosphatase) family 16 60 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1121 Vvi-Chr1 14501379 14501604 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1121 18 67 Calmodulin-binding Proteins AT3G04080 68.000 2.78e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1121 K14641 - vvi:100267968 96.2857