Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1119 ATGTCGCAAGACACCGATCAAAGTTGGGGGAATTTGGAAAGGAAATACTCTCATACAGTTGGAGTGGTTGATCTTGGAGGTGGTTCTATTCAAATGACATATGCCATCTCAGAGATAGCTACTGAAAAAGCTTCAAAGATCTCAGATGGAGATGACACATATGTTAAGGAAATGTACCTCAAAGGAGGAGAATACTTCCTCTATGTTCACAGCACTGCAGATAACCCTTTGACCGGGTGGGAATTGATTCTAACTTACCATTATCAGCTTGCAGCCCACTACTTGAAGGAGAAGAGGTTATGTTTGGAACTTGCACCGTCAATGATAGAAACTATTGGTGAGATTGATGGCACTGCTGAATCCGTGTTTCCTTCGATTTATGTTGGGGACAACTATGTTCATCGTCTAACCCAATATAAAACATATGGAAATCTAGTTGAGTTGAATGCTCATTGTGTGTATGCTGATCATGGTTGTGGAAGTTGTGATTGTAACGATGATACTAGAATTAGTGAGGCTCTTTTGAACACCAGAGTTGAAGTTATTGTCAATAAGTACAATGATCTCCTCACCACCCAACTTGAGAACCAAAAATTGCATTTTGAGTCTCTACTGCTAGAAGTCAAAGAAGAACTATGA 639 0.3991 MSQDTDQSWGNLERKYSHTVGVVDLGGGSIQMTYAISEIATEKASKISDGDDTYVKEMYLKGGEYFLYVHSTADNPLTGWELILTYHYQLAAHYLKEKRLCLELAPSMIETIGEIDGTAESVFPSIYVGDNYVHRLTQYKTYGNLVELNAHCVYADHGCGSCDCNDDTRISEALLNTRVEVIVNKYNDLLTTQLENQKLHFESLLLEVKEEL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1119 212 Pfam GDA1/CD39 (nucleoside phosphatase) family 12 71 IPR000407 GO:0016787
Vvi1g1119 212 PANTHER BRCA1-ASSOCIATED PROTEIN 127 211 - -
Vvi1g1119 212 Gene3D Exopolyphosphatase. Domain 2 6 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1119 Vvi-Chr1 14459998 14461572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1119 12 71 Calmodulin-binding Proteins AT3G04080 65.000 3.40e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1119 K10632 - vvi:100242688 145.591