Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1047 ATGGAGAAGCAAAGTGAAGTGAAGTTGTTTGGGACATGGGCTAGTGTCTACTGCACCAGAATTGAGTTGGCTCTCAAACTCAAGGGCATACCCTACGAGTATGTAGAGGAAGACTTACCTAACAAGAGCGACTTGCTAATTCACCACAATCCTGTGCACAAGAAGGTCCCTGTGCTCGTCCACAACGGGAAAGCCATTGCAGAATCGCTTGTCATCCTTGAATACATTGATGAGCACTGGAACCACACTCCCAAATTGTTGCCAGCGGATCCATATGAGAGAGCCAAAGTTAGATTCTGGGCCAACTTTTATGATCAGAAGTTTGGTCCAAGTATTTACAACATCATGACTTCCAAAGGCAAAGAGCAAGAAAAAGCCATAGAGGACTCCCTTGAGGTGCTTAAGGTGTTTGAAGAAGGCATAGAGAGAGACTTCCCAGCAAAATCTCCATTCTTGAATGGAGGCACCTTGGGATTTCTCGATATTGTAGTGGGATCAAGTTCTTGCAATTTCAAAGCTTTTAATGAGGTATTTGCTGTGGTTTTCGACCCAGAGAAGAACCCTGCATTCTGCTCTTGGGTGACCGCTATGAAAGAATGCCCACTGATGAAGGAGACCCTCCCACCTCATGACCGTCTGGTTGCCAAGATATCCAAATTATTTCTGCAGCCACCTAAAGCTTGA 684 0.4532 MEKQSEVKLFGTWASVYCTRIELALKLKGIPYEYVEEDLPNKSDLLIHHNPVHKKVPVLVHNGKAIAESLVILEYIDEHWNHTPKLLPADPYERAKVRFWANFYDQKFGPSIYNIMTSKGKEQEKAIEDSLEVLKVFEEGIERDFPAKSPFLNGGTLGFLDIVVGSSSCNFKAFNEVFAVVFDPEKNPAFCSWVTAMKECPLMKETLPPHDRLVAKISKLFLQPPKA* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1047 227 Gene3D Glutaredoxin 1 86 - -
Vvi1g1047 227 SFLD Main.3: Omega- and Tau-like 3 220 IPR045073 -
Vvi1g1047 227 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Vvi1g1047 227 FunFam Glutathione S-transferase U9 87 227 - -
Vvi1g1047 227 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Vvi1g1047 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 227 IPR010987 -
Vvi1g1047 227 SUPERFAMILY GST C-terminal domain-like 78 219 IPR036282 -
Vvi1g1047 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Vvi1g1047 227 FunFam Glutathione S-transferase U10 1 85 - -
Vvi1g1047 227 Gene3D - 87 225 - -
Vvi1g1047 227 SFLD Glutathione Transferase (cytosolic) 3 220 IPR040079 -
Vvi1g1047 227 CDD GST_C_Tau 91 220 IPR045074 GO:0004364|GO:0006749
Vvi1g1047 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 213 IPR045073 -
Vvi1g1047 227 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1047 Vvi-Chr1 11974912 11975715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1047 2 219 Glutathione S-transferase Gene Family AT1G74590 46.119 1.80e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1047 K00799 - vvi:100263691 469.929