Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1045 ATGGAGAAGCAAAGTGAAGTGAAGTTGTTTGGGACATGGTCTAGTGGCTACTGCACCAGAATTAAGTTAGCTCTCAAACTCAAGGGCATACCCTACGAGTACGTAGAAGAAGACCTATCTAACAAGAGCGACTTGCTGATTCACCACAATCCTGTCCACAAGAAGGTGCCCGTACTCGTCCACAATGGGAAAGCCATTGCAGAATCGCTCGTCATCCTTGAATACATTGATGAGCACTGGAACCACACTCCCAAATTGTTGCCGGAGGATCCATATGAGAGAGCTAAAGTTCGATTCTGGGCCAACTTTTATGATCAGAAGTTTAAGCCAAGTATCTACAACATCATGACTTCCAAAGGCAAAGAGCAAGAAAAAGCCATAGAGGACTCCCGTGAGGTGCTTATGGTGTTTGAAGAAGGCATAGAGAGAGATTTCCCAGCAAAATCTCCATTCTTGAATGGAGGCCCCTTGGGATTCCTCGATATTGTGGTGGGATCAAGTGCTTGCAATTACAAAGCTATGAATGAGGTAGTTGGTGTGGTTGTCGACCCCAAAAAGAACCCTGCATTTTGCTATTGGATGGCTGCGATGAAAGACTGCCCACTGATGAAGGAGACCCTCCCACCTCATGATCGCCTGGTTGCCAAGATGAGATCCAAATTCTCTCTGCAGCCACCTAAAACTTGA 687 0.4614 MEKQSEVKLFGTWSSGYCTRIKLALKLKGIPYEYVEEDLSNKSDLLIHHNPVHKKVPVLVHNGKAIAESLVILEYIDEHWNHTPKLLPEDPYERAKVRFWANFYDQKFKPSIYNIMTSKGKEQEKAIEDSREVLMVFEEGIERDFPAKSPFLNGGPLGFLDIVVGSSACNYKAMNEVVGVVVDPKKNPAFCYWMAAMKDCPLMKETLPPHDRLVAKMRSKFSLQPPKT* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1045 228 SFLD Main (cytGST) 3 220 - -
Vvi1g1045 228 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
Vvi1g1045 228 FunFam Glutathione S-transferase U9 87 225 - -
Vvi1g1045 228 ProSiteProfiles Glutaredoxin domain profile. 1 94 - -
Vvi1g1045 228 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Vvi1g1045 228 SFLD Main.3: Omega- and Tau-like 3 220 IPR045073 -
Vvi1g1045 228 SUPERFAMILY GST C-terminal domain-like 78 221 IPR036282 -
Vvi1g1045 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Vvi1g1045 228 CDD GST_C_Tau 91 218 IPR045074 GO:0004364|GO:0006749
Vvi1g1045 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 213 IPR045073 -
Vvi1g1045 228 CDD GST_N_Tau 7 80 - -
Vvi1g1045 228 Gene3D - 87 227 - -
Vvi1g1045 228 Gene3D Glutaredoxin 1 86 - -
Vvi1g1045 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 228 IPR010987 -
Vvi1g1045 228 FunFam Glutathione S-transferase U10 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1045 Vvi-Chr1 11948173 11948987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1045 2 215 Glutathione S-transferase Gene Family AT1G74590 47.442 3.00e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1045 K00799 - vvi:100260235 474.167