Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1037 ATGGATATCTCTGACATTGCGAAGAAGCTAGGTCTATCCGATTCCAAACACATCATCCGAAAAGCCGCCGAGCTCCGCCGCCTCTGCGACATCCAGTTCGATTCTTCTGTCATCGGAGTTGGGGAGATCTGCAAGGCCATAATCTGCTTAGAAATCGCCGCTTCAAGATGGGAAGAAGTCATTTTTGATCGCCCGAGCGCGATAAAATTGAGTGGCATGTCAGAGAAGGCATATAATCGATCGTTCAATGCAATGCAGAATGGTCTTGGTGTCAAGACAAAGCTGGATATTAGAGAATTGGGGATTCGGTTTGGATGTGTTAGGCTCATTCCTTTCGTGCAGAAGGGTCTGTCACTCTATAAGGATCGATTTCTTGCATCATTGCCAGCTTCTCGGCGGACAAGTGCTGACTTCACTCGGCCAGTATTTACTGCTGTAGCATTCTACTTGTGTGCAAAAAGGCACAAGCTGAAGATAGACAAGCTTAAGTTGATTGAGCTTTGTGGGACATCCGAATCTGAATTTTCCTCTGTTTCTACATCTATGAAGGACCTATGTCATGATGTCTTTGGGATCTCCAAGGAGAAAAAAGACCCCAAGGATGTGAAAGGGAACCGAGAACTGTTGGATACATTACCTGGGAAAAGGAAACTTGATGATGGTGGTTATTCATCTGATGATGCACTGGAGCTTTCAAGTTACAAGCGGCGTAAACAAAAGGATAAACTTGCTTATGAGGAATGGAAATCTTCTGTAACTGCAGCTAATAAGCAAAGCAAGGCCAAAGTTCCTAGTAGGCAAACTAAGCAAACTAAACTCGACTTTCAGAAGGAAGTTCCTGAGACCCAGAAGTTGGAGGCTATGTAA 867 0.4452 MDISDIAKKLGLSDSKHIIRKAAELRRLCDIQFDSSVIGVGEICKAIICLEIAASRWEEVIFDRPSAIKLSGMSEKAYNRSFNAMQNGLGVKTKLDIRELGIRFGCVRLIPFVQKGLSLYKDRFLASLPASRRTSADFTRPVFTAVAFYLCAKRHKLKIDKLKLIELCGTSESEFSSVSTSMKDLCHDVFGISKEKKDPKDVKGNRELLDTLPGKRKLDDGGYSSDDALELSSYKRRKQKDKLAYEEWKSSVTAANKQSKAKVPSRQTKQTKLDFQKEVPETQKLEAM* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1037 288 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 278 IPR020529 GO:0005664|GO:0006260
Vvi1g1037 288 MobiDBLite consensus disorder prediction 255 288 - -
Vvi1g1037 288 MobiDBLite consensus disorder prediction 271 288 - -
Vvi1g1037 288 MobiDBLite consensus disorder prediction 255 270 - -
Vvi1g1037 288 FunFam Origin recognition complex subunit 6 93 189 - -
Vvi1g1037 288 Gene3D - 93 189 - -
Vvi1g1037 288 CDD Orc6_mid 94 189 - -
Vvi1g1037 288 Pfam Origin recognition complex subunit 6 (ORC6) 3 93 IPR008721 GO:0003677|GO:0005664|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1037 1 287 Core DNA Replication Machinery Family AT1G26840 66.202 3.41e-135 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1037 K02608 - vvi:100248173 543.502