Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1011 ATGCCGGAGACGATGGACGCACCCTCGATCCGAGTTCCATACAAGAATCTGAAGCAGGCTGAGGTTGAATTGGTTGCCGCCGACGAACCTCGCCATGGAGCCGACTTGAATTCTAGGGTTCCCAATGGGACATCTGATCCCTCATCTAGCCCTTCATCCATTACTCATCCACCCAAACACGGTGGTTTGAGGACTTTGATTCTCAGTTGTATGATTGCCGCCGGTGTTCAATTTGGTTGGGCCTTGCAGCTTTCCCTATTGACTCCTTATATTCAGACACTTGGAATAGAGCATGCCTTTTCTTCATTTATCTGGCTTTGTGGCCCTATTACAGGCCTTGTGGTTCAGCCTTGTGTTGGGATATGGAGTGACAAGTGCTCTTCAAAATATGGAAGAAGACGACCATTTATTCTTGCTGGGTCTCTAATGATCTCAGTTGCTGTGACAATTATTGGGTTTTCTGCAGACATTGGATATTTATTAGGAGATACCAATATGGATTGCAGAAAATTTAAAGGTACTCGAACATGGGCAGCTATTATTTTTGTCCTTGGATTTTGGATGCTAGATCTTGCAAACAATACGGTGCAGGGCCCAGCTCGTGCTCTTCTAGCTGATCTATCAGGTCCTGATCAGCGAAATTCAGCAAATGCCATCTTTTGCTCATGGATGGCTGTGGGAAACATTCTAGGATTTTCTGCTGGTGCTAGTGGACACTGGCATAGATGGTTTCCTTTTCTGTTAAATAAAGCTTGCTGTGAAGCCTGTGGGAATCTTAAAGCAGCATTTCTAATCGCAGTGGTCTTCCTGACTTTGTGTACCCTTGTGACTTTATATTTTGCTGAGGAGGTTCCATTGATGGCATACCAGCCTCACCATTTATCAGACTCTGCGCCTTTATTGGATAATCCTCAACAAATTGGGTTTGATAATTCAAAATCAAAGCTTGATATGTCAGCTGTTGATAATGCCACTGGTAACAACCCTGAGAGCAGTTATGAAATCAATAAAAATGCAAAACATCTCACTCCGATCGTTCAAGAACAAAATGAAAGTTTCAGTGATGGACCTGGAGCAGTATTGGTCAATCTGTTGACAAGCCTAAGGCATTTGCCACCTGCAATGCATTCAGTGCTTCTTGTCATGGCTCTTAGTTGGCTGTCCTGGTTTCCCTTCTTTCTTTTTGATACGGATTGGATGGGTAGAGAAGTTTATCATGGGGATCCTAAAGGGGATGAGTCTGCAGTTAAAGCATATGATGCTGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCAGTTGTTCTTGGCATTAGCTCTTTCCTTATTGAACCCATGTGTCAGCGGATGGGGGCAAGGCTGGTTTGGGCCATGAGCAATTTTATTGTGTTTGCCTGCATGGCTGGCACTGCTATTATTAGTCTGGTTTCTGTCAACAAATATATTACTGAAGGGATTCAACATGCAATTGGAGAGAATAGAGCAATCAAGATCGCTTCATTGGTTGTGTTTGCTCTTCTTGGCTTTCCTCTTTCTATTACCTATAGTGTTCCTTTTTCTATCACAGCAGAGTTGACTGCTGATACAGGTGGTGGCCAAGGATTGGCTATTGGAGTTTTGAATCTTGCAATTGTCATTCCTCAGATGATTGTTTCCCTTGGTGCGGGTCCATGGGATGCTTTATTTGGTGGAGGAAACATACCTGCCTTTGTGCTAGCTGCATTGTTTGCCCTAGCAGCTGGTGTTATTGCAATTCTCAAGCTGCCAAACCTTTCGAGTAGTTCGTACAAATCATCTGGTTTTCATTTTGGATAA 1818 0.4345 MPETMDAPSIRVPYKNLKQAEVELVAADEPRHGADLNSRVPNGTSDPSSSPSSITHPPKHGGLRTLILSCMIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMISVAVTIIGFSADIGYLLGDTNMDCRKFKGTRTWAAIIFVLGFWMLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGHWHRWFPFLLNKACCEACGNLKAAFLIAVVFLTLCTLVTLYFAEEVPLMAYQPHHLSDSAPLLDNPQQIGFDNSKSKLDMSAVDNATGNNPESSYEINKNAKHLTPIVQEQNESFSDGPGAVLVNLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGDESAVKAYDAGVREGAFGLLLNSVVLGISSFLIEPMCQRMGARLVWAMSNFIVFACMAGTAIISLVSVNKYITEGIQHAIGENRAIKIASLVVFALLGFPLSITYSVPFSITAELTADTGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLAALFALAAGVIAILKLPNLSSSSYKSSGFHFG* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1011 605 MobiDBLite consensus disorder prediction 38 56 - -
Vvi1g1011 605 PANTHER SUGAR TRANSPORTER 63 588 - -
Vvi1g1011 605 FunFam Sucrose transport protein SUT5 376 597 - -
Vvi1g1011 605 MobiDBLite consensus disorder prediction 33 58 - -
Vvi1g1011 605 FunFam Sucrose transporter SUC2 64 288 - -
Vvi1g1011 605 CDD MFS_SLC45_SUC 66 568 - -
Vvi1g1011 605 Gene3D MFS general substrate transporter like domains 62 589 IPR036259 -
Vvi1g1011 605 Pfam Major Facilitator Superfamily 73 545 IPR011701 GO:0022857|GO:0055085
Vvi1g1011 605 SUPERFAMILY MFS general substrate transporter 64 591 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1011 Vvi-Chr1 11312964 11322647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1011 153 605 Sucrose Transporter Gene Family AT2G02860 69.163 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1011 K15378 - vvi:100232845 1169.45